Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
Mmp9P41245 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp9P41245 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.87■□□□□ 0.45
Mmp9P41245 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp9P41245 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp9P41245 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp9P41245 Mir6538-201ENSMUST00000183713 110 ntBASIC17.86■□□□□ 0.45
Mmp9P41245 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.86■□□□□ 0.45
Mmp9P41245 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp9P41245 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp9P41245 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp9P41245 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp9P41245 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp9P41245 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp9P41245 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Mmp9P41245 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp9P41245 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp9P41245 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp9P41245 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp9P41245 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp9P41245 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp9P41245 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.83■□□□□ 0.45
Mmp9P41245 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp9P41245 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp9P41245 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Mmp9P41245 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.83■□□□□ 0.44
Mmp9P41245 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.83■□□□□ 0.44
Mmp9P41245 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp9P41245 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.83■□□□□ 0.44
Mmp9P41245 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp9P41245 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp9P41245 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.83■□□□□ 0.44
Mmp9P41245 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp9P41245 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp9P41245 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp9P41245 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp9P41245 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.82■□□□□ 0.44
Mmp9P41245 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp9P41245 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp9P41245 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp9P41245 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Mmp9P41245 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Mmp9P41245 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp9P41245 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp9P41245 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp9P41245 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp9P41245 Gm22567-201ENSMUST00000175542 342 ntBASIC17.81■□□□□ 0.44
Mmp9P41245 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
Mmp9P41245 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.81■□□□□ 0.44
Mmp9P41245 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Mmp9P41245 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp9P41245 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp9P41245 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp9P41245 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp9P41245 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp9P41245 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Mmp9P41245 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp9P41245 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp9P41245 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Mmp9P41245 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp9P41245 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp9P41245 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp9P41245 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp9P41245 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp9P41245 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp9P41245 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.79■□□□□ 0.44
Mmp9P41245 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp9P41245 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Mmp9P41245 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp9P41245 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp9P41245 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Mmp9P41245 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp9P41245 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp9P41245 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Mmp9P41245 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp9P41245 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp9P41245 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp9P41245 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp9P41245 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp9P41245 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp9P41245 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp9P41245 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.77■□□□□ 0.44
Mmp9P41245 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Mmp9P41245 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp9P41245 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp9P41245 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp9P41245 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp9P41245 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Mmp9P41245 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Mmp9P41245 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Mmp9P41245 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp9P41245 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp9P41245 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp9P41245 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Mmp9P41245 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp9P41245 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.75■□□□□ 0.43
Mmp9P41245 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp9P41245 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp9P41245 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Mmp9P41245 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms