Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a11P31650 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a11P31650 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.29■□□□□ 0.84
Slc6a11P31650 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.29■□□□□ 0.84
Slc6a11P31650 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a11P31650 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a11P31650 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a11P31650 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a11P31650 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Slc6a11P31650 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a11P31650 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a11P31650 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a11P31650 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Slc6a11P31650 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a11P31650 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a11P31650 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a11P31650 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a11P31650 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.26■□□□□ 0.83
Slc6a11P31650 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a11P31650 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a11P31650 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a11P31650 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a11P31650 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.25■□□□□ 0.83
Slc6a11P31650 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Slc6a11P31650 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a11P31650 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Slc6a11P31650 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a11P31650 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc6a11P31650 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a11P31650 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a11P31650 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a11P31650 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a11P31650 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a11P31650 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a11P31650 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a11P31650 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.24■□□□□ 0.83
Slc6a11P31650 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a11P31650 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a11P31650 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc6a11P31650 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Slc6a11P31650 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a11P31650 Gm10420-201ENSMUST00000121713 882 ntBASIC20.23■□□□□ 0.83
Slc6a11P31650 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a11P31650 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Slc6a11P31650 Gm5921-201ENSMUST00000075898 882 ntBASIC20.23■□□□□ 0.83
Slc6a11P31650 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a11P31650 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a11P31650 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a11P31650 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a11P31650 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Slc6a11P31650 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a11P31650 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a11P31650 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a11P31650 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a11P31650 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Slc6a11P31650 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a11P31650 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.22■□□□□ 0.83
Slc6a11P31650 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a11P31650 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a11P31650 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a11P31650 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a11P31650 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a11P31650 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a11P31650 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.21■□□□□ 0.83
Slc6a11P31650 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Slc6a11P31650 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.2■□□□□ 0.82
Slc6a11P31650 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a11P31650 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a11P31650 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a11P31650 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Slc6a11P31650 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.2■□□□□ 0.82
Slc6a11P31650 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a11P31650 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a11P31650 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a11P31650 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc6a11P31650 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Slc6a11P31650 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc6a11P31650 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc6a11P31650 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc6a11P31650 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.18■□□□□ 0.82
Slc6a11P31650 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.18■□□□□ 0.82
Slc6a11P31650 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a11P31650 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Slc6a11P31650 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.18■□□□□ 0.82
Slc6a11P31650 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Slc6a11P31650 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a11P31650 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a11P31650 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.18■□□□□ 0.82
Slc6a11P31650 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a11P31650 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Slc6a11P31650 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a11P31650 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Slc6a11P31650 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.16■□□□□ 0.82
Slc6a11P31650 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a11P31650 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a11P31650 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Slc6a11P31650 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Slc6a11P31650 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a11P31650 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a11P31650 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms