Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cd40P27512 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cd40P27512 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd40P27512 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd40P27512 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd40P27512 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd40P27512 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd40P27512 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Cd40P27512 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cd40P27512 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cd40P27512 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd40P27512 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd40P27512 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.47■□□□□ 0.71
Cd40P27512 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd40P27512 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd40P27512 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cd40P27512 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd40P27512 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd40P27512 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd40P27512 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd40P27512 Gm45444-201ENSMUST00000211394 898 ntBASIC19.46■□□□□ 0.71
Cd40P27512 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd40P27512 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.46■□□□□ 0.71
Cd40P27512 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cd40P27512 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd40P27512 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd40P27512 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.45■□□□□ 0.7
Cd40P27512 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.45■□□□□ 0.7
Cd40P27512 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cd40P27512 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.45■□□□□ 0.7
Cd40P27512 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.45■□□□□ 0.7
Cd40P27512 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd40P27512 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd40P27512 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cd40P27512 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cd40P27512 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd40P27512 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd40P27512 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.44■□□□□ 0.7
Cd40P27512 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd40P27512 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cd40P27512 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd40P27512 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd40P27512 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.44■□□□□ 0.7
Cd40P27512 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40P27512 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40P27512 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40P27512 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40P27512 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40P27512 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.43■□□□□ 0.7
Cd40P27512 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40P27512 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40P27512 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40P27512 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40P27512 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.43■□□□□ 0.7
Cd40P27512 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40P27512 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cd40P27512 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40P27512 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40P27512 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40P27512 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40P27512 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cd40P27512 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40P27512 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.42■□□□□ 0.7
Cd40P27512 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40P27512 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.41■□□□□ 0.7
Cd40P27512 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40P27512 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40P27512 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Cd40P27512 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40P27512 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40P27512 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40P27512 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40P27512 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd40P27512 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd40P27512 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cd40P27512 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.4■□□□□ 0.7
Cd40P27512 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Cd40P27512 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cd40P27512 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Cd40P27512 Gm43566-201ENSMUST00000196851 808 ntBASIC19.39■□□□□ 0.69
Cd40P27512 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cd40P27512 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd40P27512 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd40P27512 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.39■□□□□ 0.69
Cd40P27512 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd40P27512 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Cd40P27512 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd40P27512 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cd40P27512 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cd40P27512 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd40P27512 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.37■□□□□ 0.69
Cd40P27512 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd40P27512 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd40P27512 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd40P27512 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd40P27512 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40P27512 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40P27512 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40P27512 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40P27512 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms