Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col8a2P25318 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Col8a2P25318 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.02■□□□□ 0.47
Col8a2P25318 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col8a2P25318 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Col8a2P25318 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col8a2P25318 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col8a2P25318 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18■□□□□ 0.47
Col8a2P25318 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18■□□□□ 0.47
Col8a2P25318 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col8a2P25318 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col8a2P25318 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col8a2P25318 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col8a2P25318 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Col8a2P25318 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col8a2P25318 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Col8a2P25318 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col8a2P25318 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col8a2P25318 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col8a2P25318 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col8a2P25318 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.99■□□□□ 0.47
Col8a2P25318 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col8a2P25318 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.99■□□□□ 0.47
Col8a2P25318 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col8a2P25318 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col8a2P25318 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col8a2P25318 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col8a2P25318 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.98■□□□□ 0.47
Col8a2P25318 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Col8a2P25318 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col8a2P25318 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col8a2P25318 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col8a2P25318 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col8a2P25318 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.98■□□□□ 0.47
Col8a2P25318 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col8a2P25318 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.97■□□□□ 0.47
Col8a2P25318 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.97■□□□□ 0.47
Col8a2P25318 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col8a2P25318 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col8a2P25318 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col8a2P25318 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col8a2P25318 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col8a2P25318 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.96■□□□□ 0.47
Col8a2P25318 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Col8a2P25318 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col8a2P25318 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Col8a2P25318 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col8a2P25318 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col8a2P25318 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.95■□□□□ 0.46
Col8a2P25318 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col8a2P25318 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col8a2P25318 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col8a2P25318 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col8a2P25318 Gm9959-201ENSMUST00000068277 390 ntBASIC17.95■□□□□ 0.46
Col8a2P25318 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col8a2P25318 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Col8a2P25318 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col8a2P25318 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Col8a2P25318 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.94■□□□□ 0.46
Col8a2P25318 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.94■□□□□ 0.46
Col8a2P25318 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col8a2P25318 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col8a2P25318 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Col8a2P25318 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Col8a2P25318 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col8a2P25318 Gm14117-201ENSMUST00000122417 843 ntBASIC17.93■□□□□ 0.46
Col8a2P25318 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col8a2P25318 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Col8a2P25318 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Col8a2P25318 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col8a2P25318 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col8a2P25318 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.92■□□□□ 0.46
Col8a2P25318 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col8a2P25318 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col8a2P25318 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.92■□□□□ 0.46
Col8a2P25318 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col8a2P25318 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col8a2P25318 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.91■□□□□ 0.46
Col8a2P25318 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Gm22567-201ENSMUST00000175542 342 ntBASIC17.91■□□□□ 0.46
Col8a2P25318 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Gm10232-201ENSMUST00000089221 720 ntBASIC17.91■□□□□ 0.46
Col8a2P25318 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col8a2P25318 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.9■□□□□ 0.46
Col8a2P25318 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col8a2P25318 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col8a2P25318 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms