Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx3P23198 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx3P23198 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx3P23198 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cbx3P23198 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx3P23198 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.36■□□□□ 0.69
Cbx3P23198 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx3P23198 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx3P23198 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx3P23198 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cbx3P23198 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cbx3P23198 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cbx3P23198 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cbx3P23198 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cbx3P23198 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cbx3P23198 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cbx3P23198 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cbx3P23198 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cbx3P23198 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cbx3P23198 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cbx3P23198 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cbx3P23198 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cbx3P23198 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cbx3P23198 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
Cbx3P23198 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Cbx3P23198 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cbx3P23198 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cbx3P23198 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cbx3P23198 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
Cbx3P23198 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cbx3P23198 Particl-201ENSMUST00000205370 1560 ntBASIC19.32■□□□□ 0.68
Cbx3P23198 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.31■□□□□ 0.68
Cbx3P23198 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cbx3P23198 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cbx3P23198 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cbx3P23198 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cbx3P23198 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cbx3P23198 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Cbx3P23198 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.31■□□□□ 0.68
Cbx3P23198 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cbx3P23198 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx3P23198 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx3P23198 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.3■□□□□ 0.68
Cbx3P23198 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx3P23198 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx3P23198 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx3P23198 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx3P23198 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx3P23198 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx3P23198 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx3P23198 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx3P23198 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Cbx3P23198 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx3P23198 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx3P23198 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx3P23198 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx3P23198 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx3P23198 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cbx3P23198 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx3P23198 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx3P23198 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx3P23198 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx3P23198 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx3P23198 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx3P23198 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx3P23198 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cbx3P23198 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx3P23198 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx3P23198 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cbx3P23198 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cbx3P23198 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cbx3P23198 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cbx3P23198 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cbx3P23198 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cbx3P23198 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cbx3P23198 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cbx3P23198 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cbx3P23198 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Cbx3P23198 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cbx3P23198 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx3P23198 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx3P23198 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx3P23198 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx3P23198 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx3P23198 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx3P23198 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cbx3P23198 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx3P23198 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cbx3P23198 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx3P23198 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cbx3P23198 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx3P23198 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.25■□□□□ 0.67
Cbx3P23198 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.25■□□□□ 0.67
Cbx3P23198 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx3P23198 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.25■□□□□ 0.67
Cbx3P23198 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx3P23198 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbx3P23198 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbx3P23198 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cbx3P23198 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms