Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.51■□□□□ 0.39
P04940 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
P04940 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P04940 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
P04940 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04940 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04940 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.51■□□□□ 0.39
P04940 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04940 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P04940 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.51■□□□□ 0.39
P04940 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04940 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
P04940 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04940 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.5■□□□□ 0.39
P04940 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04940 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
P04940 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P04940 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.5■□□□□ 0.39
P04940 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04940 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04940 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04940 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04940 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
P04940 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04940 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04940 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04940 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
P04940 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.48■□□□□ 0.39
P04940 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.48■□□□□ 0.39
P04940 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
P04940 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
P04940 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
P04940 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04940 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04940 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04940 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.47■□□□□ 0.39
P04940 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04940 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
P04940 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04940 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
P04940 Cap2-205ENSMUST00000225824 1634 ntBASIC17.47■□□□□ 0.39
P04940 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.46■□□□□ 0.39
P04940 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04940 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04940 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04940 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.46■□□□□ 0.39
P04940 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
P04940 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P04940 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
P04940 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
P04940 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04940 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
P04940 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
P04940 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.45■□□□□ 0.38
P04940 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04940 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.45■□□□□ 0.38
P04940 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P04940 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
P04940 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P04940 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04940 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04940 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04940 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04940 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04940 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04940 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04940 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.44■□□□□ 0.38
P04940 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
P04940 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04940 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04940 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04940 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04940 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P04940 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04940 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04940 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
P04940 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
P04940 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04940 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04940 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04940 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04940 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04940 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04940 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04940 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.42■□□□□ 0.38
P04940 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04940 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04940 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
P04940 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
P04940 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04940 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04940 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04940 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04940 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.41■□□□□ 0.38
P04940 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04940 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04940 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04940 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.4■□□□□ 0.38
P04940 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
P04940 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms