Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Abcd4O89016 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcd4O89016 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.32■□□□□ 0.68
Abcd4O89016 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcd4O89016 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcd4O89016 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.32■□□□□ 0.68
Abcd4O89016 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcd4O89016 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Abcd4O89016 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcd4O89016 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcd4O89016 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Abcd4O89016 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.31■□□□□ 0.68
Abcd4O89016 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abcd4O89016 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Abcd4O89016 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.3■□□□□ 0.68
Abcd4O89016 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Abcd4O89016 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abcd4O89016 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.3■□□□□ 0.68
Abcd4O89016 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abcd4O89016 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.3■□□□□ 0.68
Abcd4O89016 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Abcd4O89016 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcd4O89016 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcd4O89016 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Abcd4O89016 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.29■□□□□ 0.68
Abcd4O89016 Gm10232-201ENSMUST00000089221 720 ntBASIC19.29■□□□□ 0.68
Abcd4O89016 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcd4O89016 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcd4O89016 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.28■□□□□ 0.68
Abcd4O89016 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abcd4O89016 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abcd4O89016 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abcd4O89016 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.28■□□□□ 0.68
Abcd4O89016 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abcd4O89016 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abcd4O89016 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abcd4O89016 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abcd4O89016 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abcd4O89016 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abcd4O89016 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Abcd4O89016 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Abcd4O89016 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abcd4O89016 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abcd4O89016 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abcd4O89016 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.26■□□□□ 0.67
Abcd4O89016 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Abcd4O89016 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcd4O89016 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcd4O89016 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Abcd4O89016 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcd4O89016 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcd4O89016 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.24■□□□□ 0.67
Abcd4O89016 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Abcd4O89016 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.23■□□□□ 0.67
Abcd4O89016 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcd4O89016 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcd4O89016 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcd4O89016 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcd4O89016 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.23■□□□□ 0.67
Abcd4O89016 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcd4O89016 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcd4O89016 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcd4O89016 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcd4O89016 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcd4O89016 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcd4O89016 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.22■□□□□ 0.67
Abcd4O89016 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcd4O89016 Gm45102-201ENSMUST00000207427 857 ntBASIC19.22■□□□□ 0.67
Abcd4O89016 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Abcd4O89016 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcd4O89016 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcd4O89016 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Abcd4O89016 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcd4O89016 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Abcd4O89016 Gm14117-201ENSMUST00000122417 843 ntBASIC19.21■□□□□ 0.67
Abcd4O89016 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Abcd4O89016 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Abcd4O89016 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcd4O89016 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcd4O89016 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Abcd4O89016 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcd4O89016 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Abcd4O89016 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Abcd4O89016 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcd4O89016 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.2■□□□□ 0.66
Abcd4O89016 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.2■□□□□ 0.66
Abcd4O89016 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Abcd4O89016 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcd4O89016 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Abcd4O89016 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Abcd4O89016 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd4O89016 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd4O89016 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd4O89016 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd4O89016 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd4O89016 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd4O89016 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd4O89016 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd4O89016 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.19■□□□□ 0.66
Abcd4O89016 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms