Protein–RNA interactions for Protein: O88986

Gcat, 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial, mousemouse

Predictions only

Length 416 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GcatO88986 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GcatO88986 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
GcatO88986 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.61■□□□□ 0.89
GcatO88986 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GcatO88986 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GcatO88986 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GcatO88986 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GcatO88986 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
GcatO88986 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GcatO88986 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GcatO88986 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GcatO88986 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GcatO88986 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
GcatO88986 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.6■□□□□ 0.89
GcatO88986 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GcatO88986 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
GcatO88986 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
GcatO88986 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GcatO88986 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
GcatO88986 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
GcatO88986 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.59■□□□□ 0.89
GcatO88986 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GcatO88986 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GcatO88986 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GcatO88986 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.59■□□□□ 0.89
GcatO88986 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.59■□□□□ 0.89
GcatO88986 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GcatO88986 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GcatO88986 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GcatO88986 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.58■□□□□ 0.89
GcatO88986 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.58■□□□□ 0.89
GcatO88986 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.58■□□□□ 0.88
GcatO88986 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.57■□□□□ 0.88
GcatO88986 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GcatO88986 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GcatO88986 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GcatO88986 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GcatO88986 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GcatO88986 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.56■□□□□ 0.88
GcatO88986 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GcatO88986 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.56■□□□□ 0.88
GcatO88986 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
GcatO88986 Gm10232-201ENSMUST00000089221 720 ntBASIC20.56■□□□□ 0.88
GcatO88986 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GcatO88986 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GcatO88986 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
GcatO88986 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GcatO88986 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GcatO88986 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.55■□□□□ 0.88
GcatO88986 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GcatO88986 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.55■□□□□ 0.88
GcatO88986 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.55■□□□□ 0.88
GcatO88986 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
GcatO88986 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GcatO88986 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.55■□□□□ 0.88
GcatO88986 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GcatO88986 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GcatO88986 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GcatO88986 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GcatO88986 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GcatO88986 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GcatO88986 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GcatO88986 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GcatO88986 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GcatO88986 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GcatO88986 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GcatO88986 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.53■□□□□ 0.88
GcatO88986 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
GcatO88986 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GcatO88986 Gm15820-201ENSMUST00000201566 728 ntBASIC20.53■□□□□ 0.88
GcatO88986 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GcatO88986 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GcatO88986 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GcatO88986 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GcatO88986 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
GcatO88986 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GcatO88986 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GcatO88986 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GcatO88986 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.52■□□□□ 0.88
GcatO88986 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.52■□□□□ 0.88
GcatO88986 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GcatO88986 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GcatO88986 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GcatO88986 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GcatO88986 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GcatO88986 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.51■□□□□ 0.87
GcatO88986 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
GcatO88986 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GcatO88986 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GcatO88986 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GcatO88986 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GcatO88986 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
GcatO88986 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.5■□□□□ 0.87
GcatO88986 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GcatO88986 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GcatO88986 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GcatO88986 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GcatO88986 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
GcatO88986 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GcatO88986 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms