Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.33■■□□□ 1.17
Syn1O88935 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Syn1O88935 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.33■■□□□ 1.17
Syn1O88935 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Syn1O88935 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.32■■□□□ 1.16
Syn1O88935 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Syn1O88935 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Syn1O88935 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Syn1O88935 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Syn1O88935 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Syn1O88935 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Syn1O88935 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Syn1O88935 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Syn1O88935 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
Syn1O88935 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Syn1O88935 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.31■■□□□ 1.16
Syn1O88935 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Syn1O88935 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.31■■□□□ 1.16
Syn1O88935 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Syn1O88935 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Syn1O88935 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Syn1O88935 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Syn1O88935 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Syn1O88935 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Syn1O88935 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.3■■□□□ 1.16
Syn1O88935 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
Syn1O88935 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Syn1O88935 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
Syn1O88935 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Syn1O88935 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.3■■□□□ 1.16
Syn1O88935 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.3■■□□□ 1.16
Syn1O88935 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.29■■□□□ 1.16
Syn1O88935 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Syn1O88935 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Syn1O88935 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Syn1O88935 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Syn1O88935 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Syn1O88935 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Syn1O88935 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
Syn1O88935 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Syn1O88935 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Syn1O88935 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Syn1O88935 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Syn1O88935 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Syn1O88935 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Syn1O88935 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.27■■□□□ 1.16
Syn1O88935 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Syn1O88935 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Syn1O88935 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Syn1O88935 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Syn1O88935 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Syn1O88935 Gm6139-201ENSMUST00000079261 882 ntBASIC22.26■■□□□ 1.15
Syn1O88935 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Syn1O88935 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Syn1O88935 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Syn1O88935 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Syn1O88935 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Syn1O88935 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.25■■□□□ 1.15
Syn1O88935 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Syn1O88935 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Syn1O88935 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Syn1O88935 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Syn1O88935 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Syn1O88935 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Syn1O88935 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Syn1O88935 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Syn1O88935 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Syn1O88935 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Syn1O88935 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Syn1O88935 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Syn1O88935 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Syn1O88935 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Syn1O88935 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Syn1O88935 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Syn1O88935 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Syn1O88935 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Syn1O88935 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
Syn1O88935 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Syn1O88935 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.22■■□□□ 1.15
Syn1O88935 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Syn1O88935 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Syn1O88935 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.22■■□□□ 1.15
Syn1O88935 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Syn1O88935 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Syn1O88935 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Syn1O88935 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Syn1O88935 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.21■■□□□ 1.15
Syn1O88935 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Syn1O88935 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC22.21■■□□□ 1.15
Syn1O88935 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.21■■□□□ 1.15
Syn1O88935 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.21■■□□□ 1.15
Syn1O88935 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.21■■□□□ 1.15
Syn1O88935 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Syn1O88935 Gm5874-201ENSMUST00000096101 508 ntBASIC22.21■■□□□ 1.15
Syn1O88935 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.21■■□□□ 1.15
Syn1O88935 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.15
Syn1O88935 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Syn1O88935 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.2■■□□□ 1.14
Syn1O88935 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC22.2■■□□□ 1.14
Syn1O88935 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms