Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac3O88895 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac3O88895 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac3O88895 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac3O88895 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac3O88895 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Hdac3O88895 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac3O88895 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac3O88895 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac3O88895 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac3O88895 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac3O88895 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac3O88895 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Hdac3O88895 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac3O88895 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac3O88895 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac3O88895 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac3O88895 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac3O88895 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.02■□□□□ 0.64
Hdac3O88895 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac3O88895 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hdac3O88895 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac3O88895 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Hdac3O88895 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Hdac3O88895 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac3O88895 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac3O88895 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac3O88895 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac3O88895 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac3O88895 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac3O88895 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac3O88895 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac3O88895 Gm43006-201ENSMUST00000197702 1602 ntBASIC19■□□□□ 0.63
Hdac3O88895 Gm22567-201ENSMUST00000175542 342 ntBASIC19■□□□□ 0.63
Hdac3O88895 AC151971.4-201ENSMUST00000214717 704 ntBASIC19■□□□□ 0.63
Hdac3O88895 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac3O88895 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Hdac3O88895 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19■□□□□ 0.63
Hdac3O88895 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hdac3O88895 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac3O88895 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.99■□□□□ 0.63
Hdac3O88895 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac3O88895 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.99■□□□□ 0.63
Hdac3O88895 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac3O88895 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.99■□□□□ 0.63
Hdac3O88895 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac3O88895 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac3O88895 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac3O88895 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac3O88895 Gm14523-201ENSMUST00000117260 558 ntBASIC18.98■□□□□ 0.63
Hdac3O88895 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac3O88895 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
Hdac3O88895 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac3O88895 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac3O88895 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac3O88895 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac3O88895 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac3O88895 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac3O88895 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac3O88895 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac3O88895 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hdac3O88895 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac3O88895 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.97■□□□□ 0.63
Hdac3O88895 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac3O88895 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.97■□□□□ 0.63
Hdac3O88895 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac3O88895 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac3O88895 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac3O88895 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac3O88895 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac3O88895 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac3O88895 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Hdac3O88895 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac3O88895 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac3O88895 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac3O88895 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac3O88895 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac3O88895 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.95■□□□□ 0.62
Hdac3O88895 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac3O88895 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac3O88895 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Hdac3O88895 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac3O88895 Notumos-201ENSMUST00000151998 2659 ntBASIC18.95■□□□□ 0.62
Hdac3O88895 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac3O88895 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac3O88895 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.94■□□□□ 0.62
Hdac3O88895 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac3O88895 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.94■□□□□ 0.62
Hdac3O88895 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac3O88895 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Hdac3O88895 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac3O88895 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac3O88895 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac3O88895 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Hdac3O88895 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.93■□□□□ 0.62
Hdac3O88895 Gm12366-201ENSMUST00000121722 873 ntBASIC18.93■□□□□ 0.62
Hdac3O88895 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.93■□□□□ 0.62
Hdac3O88895 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.93■□□□□ 0.62
Hdac3O88895 Gm5786-201ENSMUST00000085368 882 ntBASIC18.93■□□□□ 0.62
Hdac3O88895 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms