Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ubr1O70481 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC28.67■■■□□ 2.18
Ubr1O70481 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ubr1O70481 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC28.66■■■□□ 2.18
Ubr1O70481 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ubr1O70481 Gm13241-201ENSMUST00000094493 780 ntBASIC28.66■■■□□ 2.18
Ubr1O70481 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ubr1O70481 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ubr1O70481 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC28.65■■■□□ 2.18
Ubr1O70481 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC28.65■■■□□ 2.18
Ubr1O70481 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ubr1O70481 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ubr1O70481 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC28.65■■■□□ 2.18
Ubr1O70481 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Ubr1O70481 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC28.65■■■□□ 2.18
Ubr1O70481 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ubr1O70481 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Ubr1O70481 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ubr1O70481 Gm12922-201ENSMUST00000120626 809 ntBASIC28.64■■■□□ 2.18
Ubr1O70481 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ubr1O70481 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ubr1O70481 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC28.62■■■□□ 2.17
Ubr1O70481 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ubr1O70481 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Ubr1O70481 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Ubr1O70481 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ubr1O70481 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC28.61■■■□□ 2.17
Ubr1O70481 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ubr1O70481 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC28.6■■■□□ 2.17
Ubr1O70481 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ubr1O70481 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Ubr1O70481 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ubr1O70481 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ubr1O70481 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ubr1O70481 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC28.59■■■□□ 2.17
Ubr1O70481 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ubr1O70481 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ubr1O70481 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Ubr1O70481 AC153890.1-201ENSMUST00000220021 2469 ntBASIC28.59■■■□□ 2.17
Ubr1O70481 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ubr1O70481 Gm9847-201ENSMUST00000052528 599 ntBASIC28.58■■■□□ 2.17
Ubr1O70481 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ubr1O70481 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ubr1O70481 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ubr1O70481 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Ubr1O70481 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ubr1O70481 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ubr1O70481 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ubr1O70481 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Ubr1O70481 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Ubr1O70481 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
Ubr1O70481 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Ubr1O70481 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Ubr1O70481 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Ubr1O70481 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
Ubr1O70481 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ubr1O70481 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ubr1O70481 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC28.53■■■□□ 2.16
Ubr1O70481 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC28.53■■■□□ 2.16
Ubr1O70481 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
Ubr1O70481 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ubr1O70481 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC28.52■■■□□ 2.16
Ubr1O70481 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ubr1O70481 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ubr1O70481 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC28.52■■■□□ 2.16
Ubr1O70481 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Ubr1O70481 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ubr1O70481 Gm43034-201ENSMUST00000198678 1364 ntBASIC28.51■■■□□ 2.15
Ubr1O70481 Gm10620-201ENSMUST00000098379 1332 ntBASIC28.51■■■□□ 2.15
Ubr1O70481 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ubr1O70481 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ubr1O70481 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Ubr1O70481 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC28.5■■■□□ 2.15
Ubr1O70481 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ubr1O70481 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC28.5■■■□□ 2.15
Ubr1O70481 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ubr1O70481 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Ubr1O70481 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ubr1O70481 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ubr1O70481 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Ubr1O70481 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ubr1O70481 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ubr1O70481 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ubr1O70481 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ubr1O70481 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ubr1O70481 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ubr1O70481 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC28.47■■■□□ 2.15
Ubr1O70481 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ubr1O70481 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Ubr1O70481 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Ubr1O70481 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC28.46■■■□□ 2.15
Ubr1O70481 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Ubr1O70481 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ubr1O70481 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ubr1O70481 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC28.45■■■□□ 2.14
Ubr1O70481 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Ubr1O70481 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ubr1O70481 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC28.44■■■□□ 2.14
Ubr1O70481 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ubr1O70481 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms