Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.26■□□□□ 0.99
Pknox1O70477 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.26■□□□□ 0.99
Pknox1O70477 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pknox1O70477 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pknox1O70477 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pknox1O70477 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Pknox1O70477 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.26■□□□□ 0.99
Pknox1O70477 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pknox1O70477 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pknox1O70477 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.26■□□□□ 0.99
Pknox1O70477 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.26■□□□□ 0.99
Pknox1O70477 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.26■□□□□ 0.99
Pknox1O70477 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pknox1O70477 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pknox1O70477 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pknox1O70477 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pknox1O70477 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Pknox1O70477 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pknox1O70477 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pknox1O70477 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pknox1O70477 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pknox1O70477 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pknox1O70477 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pknox1O70477 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pknox1O70477 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.24■□□□□ 0.99
Pknox1O70477 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.24■□□□□ 0.99
Pknox1O70477 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pknox1O70477 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pknox1O70477 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pknox1O70477 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pknox1O70477 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pknox1O70477 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pknox1O70477 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pknox1O70477 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
Pknox1O70477 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pknox1O70477 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pknox1O70477 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pknox1O70477 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pknox1O70477 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.21■□□□□ 0.99
Pknox1O70477 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pknox1O70477 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pknox1O70477 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pknox1O70477 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pknox1O70477 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pknox1O70477 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pknox1O70477 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pknox1O70477 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pknox1O70477 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pknox1O70477 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pknox1O70477 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pknox1O70477 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pknox1O70477 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pknox1O70477 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pknox1O70477 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pknox1O70477 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pknox1O70477 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pknox1O70477 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pknox1O70477 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pknox1O70477 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pknox1O70477 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Pknox1O70477 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pknox1O70477 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pknox1O70477 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pknox1O70477 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pknox1O70477 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pknox1O70477 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pknox1O70477 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.17■□□□□ 0.98
Pknox1O70477 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pknox1O70477 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pknox1O70477 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pknox1O70477 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pknox1O70477 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pknox1O70477 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Pknox1O70477 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pknox1O70477 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pknox1O70477 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pknox1O70477 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pknox1O70477 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pknox1O70477 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pknox1O70477 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pknox1O70477 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pknox1O70477 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.14■□□□□ 0.97
Pknox1O70477 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pknox1O70477 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pknox1O70477 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pknox1O70477 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Pknox1O70477 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pknox1O70477 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Pknox1O70477 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pknox1O70477 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pknox1O70477 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pknox1O70477 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pknox1O70477 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pknox1O70477 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pknox1O70477 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pknox1O70477 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.11■□□□□ 0.97
Pknox1O70477 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.11■□□□□ 0.97
Pknox1O70477 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.11■□□□□ 0.97
Pknox1O70477 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pknox1O70477 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms