Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim3O70209 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pdlim3O70209 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim3O70209 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.43■□□□□ 0.7
Pdlim3O70209 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim3O70209 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.43■□□□□ 0.7
Pdlim3O70209 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim3O70209 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pdlim3O70209 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.43■□□□□ 0.7
Pdlim3O70209 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim3O70209 Gm7432-201ENSMUST00000210343 879 ntBASIC19.42■□□□□ 0.7
Pdlim3O70209 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim3O70209 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pdlim3O70209 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim3O70209 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim3O70209 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.41■□□□□ 0.7
Pdlim3O70209 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim3O70209 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.41■□□□□ 0.7
Pdlim3O70209 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.41■□□□□ 0.7
Pdlim3O70209 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim3O70209 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim3O70209 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim3O70209 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim3O70209 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim3O70209 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Pdlim3O70209 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim3O70209 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.4■□□□□ 0.7
Pdlim3O70209 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim3O70209 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pdlim3O70209 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim3O70209 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim3O70209 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim3O70209 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim3O70209 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pdlim3O70209 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim3O70209 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim3O70209 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pdlim3O70209 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim3O70209 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim3O70209 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pdlim3O70209 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim3O70209 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim3O70209 Gm11599-201ENSMUST00000118720 878 ntBASIC19.38■□□□□ 0.69
Pdlim3O70209 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Pdlim3O70209 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim3O70209 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.38■□□□□ 0.69
Pdlim3O70209 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pdlim3O70209 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim3O70209 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim3O70209 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.37■□□□□ 0.69
Pdlim3O70209 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim3O70209 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim3O70209 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim3O70209 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pdlim3O70209 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim3O70209 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.36■□□□□ 0.69
Pdlim3O70209 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pdlim3O70209 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim3O70209 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pdlim3O70209 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim3O70209 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim3O70209 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Pdlim3O70209 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim3O70209 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim3O70209 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim3O70209 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.35■□□□□ 0.69
Pdlim3O70209 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim3O70209 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.35■□□□□ 0.69
Pdlim3O70209 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
Pdlim3O70209 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim3O70209 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim3O70209 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pdlim3O70209 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim3O70209 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim3O70209 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Pdlim3O70209 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim3O70209 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdlim3O70209 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdlim3O70209 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.33■□□□□ 0.68
Pdlim3O70209 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdlim3O70209 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdlim3O70209 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pdlim3O70209 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim3O70209 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Pdlim3O70209 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim3O70209 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim3O70209 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim3O70209 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pdlim3O70209 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pdlim3O70209 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim3O70209 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pdlim3O70209 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pdlim3O70209 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim3O70209 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Pdlim3O70209 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim3O70209 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim3O70209 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.3■□□□□ 0.68
Pdlim3O70209 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim3O70209 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim3O70209 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms