Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh12O55134 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdh12O55134 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdh12O55134 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh12O55134 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh12O55134 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh12O55134 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh12O55134 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh12O55134 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh12O55134 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh12O55134 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh12O55134 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdh12O55134 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdh12O55134 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh12O55134 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh12O55134 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh12O55134 Gm5921-201ENSMUST00000075898 882 ntBASIC19.38■□□□□ 0.69
Pcdh12O55134 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh12O55134 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh12O55134 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh12O55134 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdh12O55134 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh12O55134 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh12O55134 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh12O55134 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.36■□□□□ 0.69
Pcdh12O55134 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh12O55134 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdh12O55134 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh12O55134 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh12O55134 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh12O55134 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdh12O55134 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh12O55134 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh12O55134 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh12O55134 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdh12O55134 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh12O55134 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh12O55134 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.35■□□□□ 0.69
Pcdh12O55134 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh12O55134 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdh12O55134 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh12O55134 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh12O55134 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.34■□□□□ 0.69
Pcdh12O55134 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdh12O55134 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh12O55134 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.33■□□□□ 0.69
Pcdh12O55134 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh12O55134 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh12O55134 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh12O55134 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh12O55134 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh12O55134 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pcdh12O55134 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdh12O55134 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh12O55134 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdh12O55134 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdh12O55134 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh12O55134 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh12O55134 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh12O55134 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh12O55134 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh12O55134 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh12O55134 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh12O55134 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh12O55134 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh12O55134 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh12O55134 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdh12O55134 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh12O55134 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh12O55134 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Pcdh12O55134 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh12O55134 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh12O55134 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh12O55134 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh12O55134 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh12O55134 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh12O55134 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdh12O55134 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh12O55134 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh12O55134 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh12O55134 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh12O55134 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh12O55134 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh12O55134 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Pcdh12O55134 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdh12O55134 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh12O55134 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh12O55134 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.29■□□□□ 0.68
Pcdh12O55134 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh12O55134 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdh12O55134 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh12O55134 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh12O55134 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh12O55134 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdh12O55134 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdh12O55134 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcdh12O55134 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh12O55134 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdh12O55134 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh12O55134 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms