Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcl13O55038 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.27■□□□□ 0.51
Cxcl13O55038 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cxcl13O55038 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cxcl13O55038 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcl13O55038 Gm7417-201ENSMUST00000192950 473 ntBASIC18.26■□□□□ 0.51
Cxcl13O55038 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.26■□□□□ 0.51
Cxcl13O55038 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcl13O55038 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcl13O55038 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cxcl13O55038 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl13O55038 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl13O55038 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl13O55038 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.25■□□□□ 0.51
Cxcl13O55038 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl13O55038 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.25■□□□□ 0.51
Cxcl13O55038 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl13O55038 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl13O55038 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl13O55038 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cxcl13O55038 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cxcl13O55038 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cxcl13O55038 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcl13O55038 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.24■□□□□ 0.51
Cxcl13O55038 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.24■□□□□ 0.51
Cxcl13O55038 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.24■□□□□ 0.51
Cxcl13O55038 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cxcl13O55038 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl13O55038 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl13O55038 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl13O55038 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.23■□□□□ 0.51
Cxcl13O55038 Gm40881-201ENSMUST00000223397 166 ntBASIC18.23■□□□□ 0.51
Cxcl13O55038 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl13O55038 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cxcl13O55038 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl13O55038 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl13O55038 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl13O55038 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl13O55038 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.22■□□□□ 0.51
Cxcl13O55038 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.22■□□□□ 0.51
Cxcl13O55038 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.22■□□□□ 0.51
Cxcl13O55038 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl13O55038 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cxcl13O55038 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl13O55038 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl13O55038 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl13O55038 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.21■□□□□ 0.51
Cxcl13O55038 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cxcl13O55038 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl13O55038 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.21■□□□□ 0.51
Cxcl13O55038 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl13O55038 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl13O55038 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl13O55038 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl13O55038 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.2■□□□□ 0.5
Cxcl13O55038 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl13O55038 Gm10399-202ENSMUST00000202768 748 ntBASIC18.2■□□□□ 0.5
Cxcl13O55038 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl13O55038 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl13O55038 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl13O55038 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl13O55038 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.19■□□□□ 0.5
Cxcl13O55038 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl13O55038 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl13O55038 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.19■□□□□ 0.5
Cxcl13O55038 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl13O55038 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl13O55038 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl13O55038 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl13O55038 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl13O55038 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl13O55038 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl13O55038 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl13O55038 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cxcl13O55038 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl13O55038 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl13O55038 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl13O55038 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.17■□□□□ 0.5
Cxcl13O55038 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
Cxcl13O55038 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.17■□□□□ 0.5
Cxcl13O55038 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl13O55038 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cxcl13O55038 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl13O55038 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl13O55038 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cxcl13O55038 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl13O55038 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl13O55038 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl13O55038 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cxcl13O55038 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cxcl13O55038 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl13O55038 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl13O55038 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl13O55038 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cxcl13O55038 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.16■□□□□ 0.5
Cxcl13O55038 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl13O55038 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cxcl13O55038 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl13O55038 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cxcl13O55038 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms