Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm2O35900 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.15■□□□□ 0.66
Lsm2O35900 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm2O35900 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lsm2O35900 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lsm2O35900 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm2O35900 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm2O35900 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm2O35900 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm2O35900 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsm2O35900 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Lsm2O35900 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm2O35900 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.14■□□□□ 0.65
Lsm2O35900 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.14■□□□□ 0.65
Lsm2O35900 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.14■□□□□ 0.65
Lsm2O35900 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm2O35900 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm2O35900 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm2O35900 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm2O35900 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Lsm2O35900 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm2O35900 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm2O35900 Terc-201ENSMUST00000082862 423 ntBASIC19.13■□□□□ 0.65
Lsm2O35900 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm2O35900 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm2O35900 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm2O35900 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm2O35900 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.12■□□□□ 0.65
Lsm2O35900 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm2O35900 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm2O35900 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm2O35900 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.11■□□□□ 0.65
Lsm2O35900 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm2O35900 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.11■□□□□ 0.65
Lsm2O35900 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.11■□□□□ 0.65
Lsm2O35900 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm2O35900 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm2O35900 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm2O35900 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm2O35900 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm2O35900 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm2O35900 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm2O35900 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Lsm2O35900 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm2O35900 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Lsm2O35900 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lsm2O35900 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm2O35900 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm2O35900 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Lsm2O35900 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lsm2O35900 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm2O35900 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm2O35900 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm2O35900 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm2O35900 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm2O35900 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm2O35900 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.09■□□□□ 0.65
Lsm2O35900 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.09■□□□□ 0.65
Lsm2O35900 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm2O35900 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.09■□□□□ 0.65
Lsm2O35900 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.08■□□□□ 0.65
Lsm2O35900 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lsm2O35900 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
Lsm2O35900 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Lsm2O35900 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lsm2O35900 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lsm2O35900 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lsm2O35900 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm2O35900 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm2O35900 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm2O35900 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.07■□□□□ 0.64
Lsm2O35900 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm2O35900 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.06■□□□□ 0.64
Lsm2O35900 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm2O35900 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm2O35900 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm2O35900 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm2O35900 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Lsm2O35900 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm2O35900 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm2O35900 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm2O35900 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm2O35900 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Lsm2O35900 Mir3960-201ENSMUST00000198213 73 ntBASIC19.04■□□□□ 0.64
Lsm2O35900 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm2O35900 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm2O35900 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm2O35900 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lsm2O35900 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm2O35900 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm2O35900 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lsm2O35900 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Lsm2O35900 Gm45364-201ENSMUST00000210883 159 ntBASIC19.03■□□□□ 0.64
Lsm2O35900 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm2O35900 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm2O35900 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.02■□□□□ 0.64
Lsm2O35900 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm2O35900 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm2O35900 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm2O35900 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms