Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfsf11O35235 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
Tnfsf11O35235 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfsf11O35235 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tnfsf11O35235 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfsf11O35235 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.67■□□□□ 0.26
Tnfsf11O35235 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Tnfsf11O35235 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfsf11O35235 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tnfsf11O35235 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfsf11O35235 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.66■□□□□ 0.26
Tnfsf11O35235 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfsf11O35235 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Tnfsf11O35235 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfsf11O35235 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfsf11O35235 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Tnfsf11O35235 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfsf11O35235 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Tnfsf11O35235 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Tnfsf11O35235 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfsf11O35235 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfsf11O35235 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfsf11O35235 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfsf11O35235 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfsf11O35235 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.63■□□□□ 0.25
Tnfsf11O35235 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfsf11O35235 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfsf11O35235 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfsf11O35235 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfsf11O35235 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Tnfsf11O35235 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.63■□□□□ 0.25
Tnfsf11O35235 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Tnfsf11O35235 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfsf11O35235 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.62■□□□□ 0.25
Tnfsf11O35235 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Tnfsf11O35235 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfsf11O35235 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfsf11O35235 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Tnfsf11O35235 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfsf11O35235 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfsf11O35235 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfsf11O35235 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfsf11O35235 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.61■□□□□ 0.25
Tnfsf11O35235 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.61■□□□□ 0.25
Tnfsf11O35235 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfsf11O35235 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.61■□□□□ 0.25
Tnfsf11O35235 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfsf11O35235 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfsf11O35235 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfsf11O35235 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.6■□□□□ 0.25
Tnfsf11O35235 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.6■□□□□ 0.25
Tnfsf11O35235 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.6■□□□□ 0.25
Tnfsf11O35235 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tnfsf11O35235 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfsf11O35235 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Tnfsf11O35235 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfsf11O35235 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfsf11O35235 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Tnfsf11O35235 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfsf11O35235 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfsf11O35235 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfsf11O35235 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfsf11O35235 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfsf11O35235 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Tnfsf11O35235 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfsf11O35235 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfsf11O35235 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Tnfsf11O35235 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Tnfsf11O35235 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfsf11O35235 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfsf11O35235 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfsf11O35235 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.58■□□□□ 0.24
Tnfsf11O35235 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfsf11O35235 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Tnfsf11O35235 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfsf11O35235 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfsf11O35235 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfsf11O35235 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfsf11O35235 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfsf11O35235 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfsf11O35235 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfsf11O35235 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms