Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.91■□□□□ 0.62
Trav13d-3J3QMG8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav13d-3J3QMG8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav13d-3J3QMG8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.9■□□□□ 0.62
Trav13d-3J3QMG8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav13d-3J3QMG8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trav13d-3J3QMG8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trav13d-3J3QMG8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav13d-3J3QMG8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Trav13d-3J3QMG8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav13d-3J3QMG8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Trav13d-3J3QMG8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav13d-3J3QMG8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav13d-3J3QMG8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav13d-3J3QMG8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.89■□□□□ 0.61
Trav13d-3J3QMG8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav13d-3J3QMG8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav13d-3J3QMG8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav13d-3J3QMG8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav13d-3J3QMG8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav13d-3J3QMG8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav13d-3J3QMG8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav13d-3J3QMG8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav13d-3J3QMG8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav13d-3J3QMG8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav13d-3J3QMG8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav13d-3J3QMG8 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.88■□□□□ 0.61
Trav13d-3J3QMG8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav13d-3J3QMG8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.88■□□□□ 0.61
Trav13d-3J3QMG8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.88■□□□□ 0.61
Trav13d-3J3QMG8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trav13d-3J3QMG8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav13d-3J3QMG8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav13d-3J3QMG8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav13d-3J3QMG8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav13d-3J3QMG8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav13d-3J3QMG8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav13d-3J3QMG8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav13d-3J3QMG8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trav13d-3J3QMG8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav13d-3J3QMG8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav13d-3J3QMG8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav13d-3J3QMG8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Trav13d-3J3QMG8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trav13d-3J3QMG8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trav13d-3J3QMG8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav13d-3J3QMG8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav13d-3J3QMG8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav13d-3J3QMG8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav13d-3J3QMG8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav13d-3J3QMG8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav13d-3J3QMG8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Trav13d-3J3QMG8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav13d-3J3QMG8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav13d-3J3QMG8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav13d-3J3QMG8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav13d-3J3QMG8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trav13d-3J3QMG8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Trav13d-3J3QMG8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav13d-3J3QMG8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav13d-3J3QMG8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trav13d-3J3QMG8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Trav13d-3J3QMG8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trav13d-3J3QMG8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav13d-3J3QMG8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav13d-3J3QMG8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav13d-3J3QMG8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trav13d-3J3QMG8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav13d-3J3QMG8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav13d-3J3QMG8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav13d-3J3QMG8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trav13d-3J3QMG8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.83■□□□□ 0.61
Trav13d-3J3QMG8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trav13d-3J3QMG8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.83■□□□□ 0.6
Trav13d-3J3QMG8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav13d-3J3QMG8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav13d-3J3QMG8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav13d-3J3QMG8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav13d-3J3QMG8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav13d-3J3QMG8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav13d-3J3QMG8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav13d-3J3QMG8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav13d-3J3QMG8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav13d-3J3QMG8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav13d-3J3QMG8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav13d-3J3QMG8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav13d-3J3QMG8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav13d-3J3QMG8 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.81■□□□□ 0.6
Trav13d-3J3QMG8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav13d-3J3QMG8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.81■□□□□ 0.6
Trav13d-3J3QMG8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav13d-3J3QMG8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav13d-3J3QMG8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav13d-3J3QMG8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav13d-3J3QMG8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav13d-3J3QMG8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Trav13d-3J3QMG8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav13d-3J3QMG8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav13d-3J3QMG8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav13d-3J3QMG8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms