Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.05■□□□□ 0.48
Chd6A3KFM7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.05■□□□□ 0.48
Chd6A3KFM7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd6A3KFM7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Chd6A3KFM7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd6A3KFM7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd6A3KFM7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.04■□□□□ 0.48
Chd6A3KFM7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.04■□□□□ 0.48
Chd6A3KFM7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd6A3KFM7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd6A3KFM7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd6A3KFM7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd6A3KFM7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd6A3KFM7 Amer2-203ENSMUST00000225247 2662 ntBASIC18.03■□□□□ 0.48
Chd6A3KFM7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd6A3KFM7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Chd6A3KFM7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chd6A3KFM7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chd6A3KFM7 Mir7071-201ENSMUST00000184847 69 ntBASIC18.03■□□□□ 0.48
Chd6A3KFM7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.02■□□□□ 0.48
Chd6A3KFM7 Gm43017-201ENSMUST00000198296 752 ntBASIC18.02■□□□□ 0.48
Chd6A3KFM7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd6A3KFM7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd6A3KFM7 Mir7075-201ENSMUST00000184187 82 ntBASIC18.02■□□□□ 0.48
Chd6A3KFM7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd6A3KFM7 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.01■□□□□ 0.47
Chd6A3KFM7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Chd6A3KFM7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd6A3KFM7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.01■□□□□ 0.47
Chd6A3KFM7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd6A3KFM7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18■□□□□ 0.47
Chd6A3KFM7 Gm10252-201ENSMUST00000209541 832 ntBASIC18■□□□□ 0.47
Chd6A3KFM7 Gm9207-201ENSMUST00000198773 1115 ntBASIC18■□□□□ 0.47
Chd6A3KFM7 Gm10493-201ENSMUST00000097270 612 ntBASIC18■□□□□ 0.47
Chd6A3KFM7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Chd6A3KFM7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd6A3KFM7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd6A3KFM7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd6A3KFM7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Chd6A3KFM7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.99■□□□□ 0.47
Chd6A3KFM7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd6A3KFM7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.98■□□□□ 0.47
Chd6A3KFM7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd6A3KFM7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd6A3KFM7 Gm10399-202ENSMUST00000202768 748 ntBASIC17.98■□□□□ 0.47
Chd6A3KFM7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd6A3KFM7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd6A3KFM7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chd6A3KFM7 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.97■□□□□ 0.47
Chd6A3KFM7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd6A3KFM7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.97■□□□□ 0.47
Chd6A3KFM7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd6A3KFM7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd6A3KFM7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd6A3KFM7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.96■□□□□ 0.47
Chd6A3KFM7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd6A3KFM7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chd6A3KFM7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd6A3KFM7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Chd6A3KFM7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Chd6A3KFM7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd6A3KFM7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Chd6A3KFM7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd6A3KFM7 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.94■□□□□ 0.46
Chd6A3KFM7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Chd6A3KFM7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd6A3KFM7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd6A3KFM7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.94■□□□□ 0.46
Chd6A3KFM7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chd6A3KFM7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chd6A3KFM7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.93■□□□□ 0.46
Chd6A3KFM7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd6A3KFM7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd6A3KFM7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Chd6A3KFM7 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.92■□□□□ 0.46
Chd6A3KFM7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Chd6A3KFM7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd6A3KFM7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd6A3KFM7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd6A3KFM7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.91■□□□□ 0.46
Chd6A3KFM7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd6A3KFM7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd6A3KFM7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.91■□□□□ 0.46
Chd6A3KFM7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd6A3KFM7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd6A3KFM7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd6A3KFM7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.9■□□□□ 0.46
Chd6A3KFM7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Chd6A3KFM7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd6A3KFM7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd6A3KFM7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Chd6A3KFM7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chd6A3KFM7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd6A3KFM7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd6A3KFM7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Chd6A3KFM7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd6A3KFM7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chd6A3KFM7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd6A3KFM7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd6A3KFM7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms