Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trav12-2A0N8N6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12-2A0N8N6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12-2A0N8N6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12-2A0N8N6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trav12-2A0N8N6 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.94■□□□□ 0.62
Trav12-2A0N8N6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav12-2A0N8N6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Trav12-2A0N8N6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12-2A0N8N6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav12-2A0N8N6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12-2A0N8N6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12-2A0N8N6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trav12-2A0N8N6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.93■□□□□ 0.62
Trav12-2A0N8N6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12-2A0N8N6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12-2A0N8N6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trav12-2A0N8N6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
Trav12-2A0N8N6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav12-2A0N8N6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav12-2A0N8N6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12-2A0N8N6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12-2A0N8N6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12-2A0N8N6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav12-2A0N8N6 Gm14523-201ENSMUST00000117260 558 ntBASIC18.91■□□□□ 0.62
Trav12-2A0N8N6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav12-2A0N8N6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12-2A0N8N6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12-2A0N8N6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12-2A0N8N6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12-2A0N8N6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12-2A0N8N6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12-2A0N8N6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Trav12-2A0N8N6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trav12-2A0N8N6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12-2A0N8N6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12-2A0N8N6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Trav12-2A0N8N6 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.89■□□□□ 0.61
Trav12-2A0N8N6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12-2A0N8N6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12-2A0N8N6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12-2A0N8N6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.88■□□□□ 0.61
Trav12-2A0N8N6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12-2A0N8N6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trav12-2A0N8N6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12-2A0N8N6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12-2A0N8N6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12-2A0N8N6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12-2A0N8N6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12-2A0N8N6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12-2A0N8N6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12-2A0N8N6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12-2A0N8N6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12-2A0N8N6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12-2A0N8N6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.87■□□□□ 0.61
Trav12-2A0N8N6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.87■□□□□ 0.61
Trav12-2A0N8N6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12-2A0N8N6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.87■□□□□ 0.61
Trav12-2A0N8N6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12-2A0N8N6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Trav12-2A0N8N6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12-2A0N8N6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12-2A0N8N6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12-2A0N8N6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Trav12-2A0N8N6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.86■□□□□ 0.61
Trav12-2A0N8N6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.86■□□□□ 0.61
Trav12-2A0N8N6 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.86■□□□□ 0.61
Trav12-2A0N8N6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12-2A0N8N6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trav12-2A0N8N6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.86■□□□□ 0.61
Trav12-2A0N8N6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-2A0N8N6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-2A0N8N6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-2A0N8N6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-2A0N8N6 Gm7332-201ENSMUST00000118351 454 ntBASIC18.85■□□□□ 0.61
Trav12-2A0N8N6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-2A0N8N6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-2A0N8N6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-2A0N8N6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.85■□□□□ 0.61
Trav12-2A0N8N6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-2A0N8N6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trav12-2A0N8N6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-2A0N8N6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.84■□□□□ 0.61
Trav12-2A0N8N6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav12-2A0N8N6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav12-2A0N8N6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav12-2A0N8N6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav12-2A0N8N6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav12-2A0N8N6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.83■□□□□ 0.6
Trav12-2A0N8N6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav12-2A0N8N6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav12-2A0N8N6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav12-2A0N8N6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav12-2A0N8N6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12-2A0N8N6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12-2A0N8N6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav12-2A0N8N6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav12-2A0N8N6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12-2A0N8N6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trav12-2A0N8N6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms