Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13d-4A0A0G2JFX3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Gm11599-201ENSMUST00000118720 878 ntBASIC14.7□□□□□ -0.06
Trav13d-4A0A0G2JFX3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.7□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Gm22567-201ENSMUST00000175542 342 ntBASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Gm9910-201ENSMUST00000195385 1550 ntBASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Trav13d-4A0A0G2JFX3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-4A0A0G2JFX3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-4A0A0G2JFX3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.64□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-4A0A0G2JFX3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-4A0A0G2JFX3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
Trav13d-4A0A0G2JFX3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.61□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms