Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav7-1A0A0G2JEV5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav7-1A0A0G2JEV5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.48■□□□□ 0.23
Trav7-1A0A0G2JEV5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-1A0A0G2JEV5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-1A0A0G2JEV5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-1A0A0G2JEV5 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.47■□□□□ 0.23
Trav7-1A0A0G2JEV5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-1A0A0G2JEV5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav7-1A0A0G2JEV5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-1A0A0G2JEV5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav7-1A0A0G2JEV5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Trav7-1A0A0G2JEV5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav7-1A0A0G2JEV5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-1A0A0G2JEV5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-1A0A0G2JEV5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav7-1A0A0G2JEV5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-1A0A0G2JEV5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav7-1A0A0G2JEV5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-1A0A0G2JEV5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-1A0A0G2JEV5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.45■□□□□ 0.22
Trav7-1A0A0G2JEV5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-1A0A0G2JEV5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-1A0A0G2JEV5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Trav7-1A0A0G2JEV5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav7-1A0A0G2JEV5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-1A0A0G2JEV5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-1A0A0G2JEV5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav7-1A0A0G2JEV5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-1A0A0G2JEV5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav7-1A0A0G2JEV5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-1A0A0G2JEV5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Trav7-1A0A0G2JEV5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trav7-1A0A0G2JEV5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-1A0A0G2JEV5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.44■□□□□ 0.22
Trav7-1A0A0G2JEV5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-1A0A0G2JEV5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-1A0A0G2JEV5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-1A0A0G2JEV5 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.42■□□□□ 0.22
Trav7-1A0A0G2JEV5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-1A0A0G2JEV5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav7-1A0A0G2JEV5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-1A0A0G2JEV5 Gm44428-201ENSMUST00000204474 874 ntBASIC16.42■□□□□ 0.22
Trav7-1A0A0G2JEV5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-1A0A0G2JEV5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav7-1A0A0G2JEV5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-1A0A0G2JEV5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-1A0A0G2JEV5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-1A0A0G2JEV5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Trav7-1A0A0G2JEV5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-1A0A0G2JEV5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-1A0A0G2JEV5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-1A0A0G2JEV5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-1A0A0G2JEV5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-1A0A0G2JEV5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-1A0A0G2JEV5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Trav7-1A0A0G2JEV5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav7-1A0A0G2JEV5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav7-1A0A0G2JEV5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-1A0A0G2JEV5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav7-1A0A0G2JEV5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-1A0A0G2JEV5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav7-1A0A0G2JEV5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.39■□□□□ 0.22
Trav7-1A0A0G2JEV5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav7-1A0A0G2JEV5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav7-1A0A0G2JEV5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-1A0A0G2JEV5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-1A0A0G2JEV5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav7-1A0A0G2JEV5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-1A0A0G2JEV5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-1A0A0G2JEV5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-1A0A0G2JEV5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-1A0A0G2JEV5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-1A0A0G2JEV5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-1A0A0G2JEV5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-1A0A0G2JEV5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.38■□□□□ 0.21
Trav7-1A0A0G2JEV5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-1A0A0G2JEV5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav7-1A0A0G2JEV5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-1A0A0G2JEV5 Gm6311-201ENSMUST00000073790 878 ntBASIC16.38■□□□□ 0.21
Trav7-1A0A0G2JEV5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-1A0A0G2JEV5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms