Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv16A0A0B4J1H3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv16A0A0B4J1H3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv16A0A0B4J1H3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv16A0A0B4J1H3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv16A0A0B4J1H3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.53■□□□□ 0.08
Trbv16A0A0B4J1H3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv16A0A0B4J1H3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv16A0A0B4J1H3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv16A0A0B4J1H3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv16A0A0B4J1H3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv16A0A0B4J1H3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv16A0A0B4J1H3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv16A0A0B4J1H3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv16A0A0B4J1H3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv16A0A0B4J1H3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv16A0A0B4J1H3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Trbv16A0A0B4J1H3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.52■□□□□ 0.08
Trbv16A0A0B4J1H3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trbv16A0A0B4J1H3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv16A0A0B4J1H3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv16A0A0B4J1H3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv16A0A0B4J1H3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv16A0A0B4J1H3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trbv16A0A0B4J1H3 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.52■□□□□ 0.07
Trbv16A0A0B4J1H3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv16A0A0B4J1H3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv16A0A0B4J1H3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Trbv16A0A0B4J1H3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv16A0A0B4J1H3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trbv16A0A0B4J1H3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
Trbv16A0A0B4J1H3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv16A0A0B4J1H3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv16A0A0B4J1H3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv16A0A0B4J1H3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv16A0A0B4J1H3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv16A0A0B4J1H3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv16A0A0B4J1H3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv16A0A0B4J1H3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.49■□□□□ 0.07
Trbv16A0A0B4J1H3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv16A0A0B4J1H3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv16A0A0B4J1H3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv16A0A0B4J1H3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv16A0A0B4J1H3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trbv16A0A0B4J1H3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Trbv16A0A0B4J1H3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv16A0A0B4J1H3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv16A0A0B4J1H3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trbv16A0A0B4J1H3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Trbv16A0A0B4J1H3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv16A0A0B4J1H3 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.48■□□□□ 0.07
Trbv16A0A0B4J1H3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv16A0A0B4J1H3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trbv16A0A0B4J1H3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trbv16A0A0B4J1H3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv16A0A0B4J1H3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv16A0A0B4J1H3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trbv16A0A0B4J1H3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trbv16A0A0B4J1H3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv16A0A0B4J1H3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv16A0A0B4J1H3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trbv16A0A0B4J1H3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv16A0A0B4J1H3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv16A0A0B4J1H3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv16A0A0B4J1H3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv16A0A0B4J1H3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.46■□□□□ 0.07
Trbv16A0A0B4J1H3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv16A0A0B4J1H3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv16A0A0B4J1H3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv16A0A0B4J1H3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv16A0A0B4J1H3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv16A0A0B4J1H3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv16A0A0B4J1H3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv16A0A0B4J1H3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv16A0A0B4J1H3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv16A0A0B4J1H3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv16A0A0B4J1H3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.45■□□□□ 0.06
Trbv16A0A0B4J1H3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trbv16A0A0B4J1H3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv16A0A0B4J1H3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv16A0A0B4J1H3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv16A0A0B4J1H3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv16A0A0B4J1H3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv16A0A0B4J1H3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv16A0A0B4J1H3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trbv16A0A0B4J1H3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.44■□□□□ 0.06
Trbv16A0A0B4J1H3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv16A0A0B4J1H3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms