Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.75■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Trbv13-3A0A0B4J1H2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv13-3A0A0B4J1H2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trbv13-3A0A0B4J1H2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.7■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv13-3A0A0B4J1H2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.68■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv13-3A0A0B4J1H2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.66■□□□□ 0.26
Trbv13-3A0A0B4J1H2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.66■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.65■□□□□ 0.26
Trbv13-3A0A0B4J1H2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.65■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trbv13-3A0A0B4J1H2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv13-3A0A0B4J1H2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.63■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms