Protein–RNA interactions for Protein: A0A0A6YXE0

Ighv1-59, Immunoglobulin heavy variable V1-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-59A0A0A6YXE0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Gm5921-201ENSMUST00000075898 882 ntBASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.09■□□□□ 0.01
Ighv1-59A0A0A6YXE0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.09■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ighv1-59A0A0A6YXE0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ighv1-59A0A0A6YXE0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv1-59A0A0A6YXE0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv1-59A0A0A6YXE0 Gm45444-201ENSMUST00000211394 898 ntBASIC15.07■□□□□ 0
Ighv1-59A0A0A6YXE0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv1-59A0A0A6YXE0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ighv1-59A0A0A6YXE0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv1-59A0A0A6YXE0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv1-59A0A0A6YXE0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv1-59A0A0A6YXE0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv1-59A0A0A6YXE0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv1-59A0A0A6YXE0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ighv1-59A0A0A6YXE0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ighv1-59A0A0A6YXE0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ighv1-59A0A0A6YXE0 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 1098 ms