Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-6A0A075B6B2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-6A0A075B6B2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-6A0A075B6B2 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.86■□□□□ 0.13
Trav6n-6A0A075B6B2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-6A0A075B6B2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6n-6A0A075B6B2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6n-6A0A075B6B2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav6n-6A0A075B6B2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6n-6A0A075B6B2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6n-6A0A075B6B2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trav6n-6A0A075B6B2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6n-6A0A075B6B2 Gm9812-201ENSMUST00000061934 968 ntBASIC15.84■□□□□ 0.13
Trav6n-6A0A075B6B2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav6n-6A0A075B6B2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6n-6A0A075B6B2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6n-6A0A075B6B2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6n-6A0A075B6B2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6n-6A0A075B6B2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6n-6A0A075B6B2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
Trav6n-6A0A075B6B2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6n-6A0A075B6B2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav6n-6A0A075B6B2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6n-6A0A075B6B2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6n-6A0A075B6B2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6n-6A0A075B6B2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6n-6A0A075B6B2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav6n-6A0A075B6B2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6n-6A0A075B6B2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6n-6A0A075B6B2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6n-6A0A075B6B2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav6n-6A0A075B6B2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6n-6A0A075B6B2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6n-6A0A075B6B2 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.81■□□□□ 0.12
Trav6n-6A0A075B6B2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6n-6A0A075B6B2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6n-6A0A075B6B2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav6n-6A0A075B6B2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6n-6A0A075B6B2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6n-6A0A075B6B2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6n-6A0A075B6B2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6n-6A0A075B6B2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6n-6A0A075B6B2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6n-6A0A075B6B2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6n-6A0A075B6B2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6n-6A0A075B6B2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trav6n-6A0A075B6B2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6n-6A0A075B6B2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6n-6A0A075B6B2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 Gm45364-201ENSMUST00000210883 159 ntBASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6n-6A0A075B6B2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav6n-6A0A075B6B2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav6n-6A0A075B6B2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6n-6A0A075B6B2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav6n-6A0A075B6B2 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.78■□□□□ 0.12
Trav6n-6A0A075B6B2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6n-6A0A075B6B2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6n-6A0A075B6B2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6n-6A0A075B6B2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6n-6A0A075B6B2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6n-6A0A075B6B2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6n-6A0A075B6B2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trav6n-6A0A075B6B2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trav6n-6A0A075B6B2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav6n-6A0A075B6B2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6n-6A0A075B6B2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav6n-6A0A075B6B2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.76■□□□□ 0.11
Trav6n-6A0A075B6B2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6n-6A0A075B6B2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6n-6A0A075B6B2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6n-6A0A075B6B2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav6n-6A0A075B6B2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6n-6A0A075B6B2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6n-6A0A075B6B2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms