Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-1A0A075B699 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-1A0A075B699 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav9d-1A0A075B699 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9d-1A0A075B699 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9d-1A0A075B699 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.48■□□□□ 0.23
Trav9d-1A0A075B699 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9d-1A0A075B699 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav9d-1A0A075B699 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav9d-1A0A075B699 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9d-1A0A075B699 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9d-1A0A075B699 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9d-1A0A075B699 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.47■□□□□ 0.23
Trav9d-1A0A075B699 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav9d-1A0A075B699 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav9d-1A0A075B699 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9d-1A0A075B699 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Trav9d-1A0A075B699 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav9d-1A0A075B699 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9d-1A0A075B699 Gm11687-201ENSMUST00000118911 886 ntBASIC16.45■□□□□ 0.22
Trav9d-1A0A075B699 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.45■□□□□ 0.22
Trav9d-1A0A075B699 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9d-1A0A075B699 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav9d-1A0A075B699 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9d-1A0A075B699 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9d-1A0A075B699 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9d-1A0A075B699 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9d-1A0A075B699 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9d-1A0A075B699 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9d-1A0A075B699 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav9d-1A0A075B699 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9d-1A0A075B699 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9d-1A0A075B699 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9d-1A0A075B699 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.44■□□□□ 0.22
Trav9d-1A0A075B699 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trav9d-1A0A075B699 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-1A0A075B699 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-1A0A075B699 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-1A0A075B699 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-1A0A075B699 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav9d-1A0A075B699 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-1A0A075B699 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-1A0A075B699 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trav9d-1A0A075B699 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trav9d-1A0A075B699 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-1A0A075B699 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-1A0A075B699 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-1A0A075B699 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-1A0A075B699 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-1A0A075B699 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav9d-1A0A075B699 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9d-1A0A075B699 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.4■□□□□ 0.22
Trav9d-1A0A075B699 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9d-1A0A075B699 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9d-1A0A075B699 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9d-1A0A075B699 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9d-1A0A075B699 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.4■□□□□ 0.22
Trav9d-1A0A075B699 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9d-1A0A075B699 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9d-1A0A075B699 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9d-1A0A075B699 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms