Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav13-1A0A075B644 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav13-1A0A075B644 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav13-1A0A075B644 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
Trav13-1A0A075B644 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-1A0A075B644 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-1A0A075B644 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-1A0A075B644 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav13-1A0A075B644 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav13-1A0A075B644 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-1A0A075B644 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.14■□□□□ 0.01
Trav13-1A0A075B644 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-1A0A075B644 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-1A0A075B644 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav13-1A0A075B644 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-1A0A075B644 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-1A0A075B644 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-1A0A075B644 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-1A0A075B644 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-1A0A075B644 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav13-1A0A075B644 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav13-1A0A075B644 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav13-1A0A075B644 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav13-1A0A075B644 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13-1A0A075B644 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13-1A0A075B644 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13-1A0A075B644 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13-1A0A075B644 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav13-1A0A075B644 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.11■□□□□ 0.01
Trav13-1A0A075B644 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav13-1A0A075B644 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-1A0A075B644 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-1A0A075B644 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-1A0A075B644 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-1A0A075B644 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-1A0A075B644 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-1A0A075B644 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-1A0A075B644 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-1A0A075B644 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav13-1A0A075B644 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav13-1A0A075B644 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav13-1A0A075B644 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-1A0A075B644 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-1A0A075B644 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav13-1A0A075B644 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-1A0A075B644 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-1A0A075B644 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-1A0A075B644 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav13-1A0A075B644 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-1A0A075B644 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav13-1A0A075B644 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.08■□□□□ 0
Trav13-1A0A075B644 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav13-1A0A075B644 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13-1A0A075B644 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13-1A0A075B644 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13-1A0A075B644 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13-1A0A075B644 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13-1A0A075B644 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms