Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Trav6-7-dv9A0A075B639 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6-7-dv9A0A075B639 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6-7-dv9A0A075B639 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6-7-dv9A0A075B639 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6-7-dv9A0A075B639 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6-7-dv9A0A075B639 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6-7-dv9A0A075B639 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6-7-dv9A0A075B639 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6-7-dv9A0A075B639 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6-7-dv9A0A075B639 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6-7-dv9A0A075B639 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav6-7-dv9A0A075B639 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav6-7-dv9A0A075B639 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav6-7-dv9A0A075B639 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-7-dv9A0A075B639 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-7-dv9A0A075B639 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-7-dv9A0A075B639 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.01■□□□□ 0.63
Trav6-7-dv9A0A075B639 Gm27502-201ENSMUST00000183495 199 ntBASIC19.01■□□□□ 0.63
Trav6-7-dv9A0A075B639 Mir6538-201ENSMUST00000183713 110 ntBASIC19.01■□□□□ 0.63
Trav6-7-dv9A0A075B639 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-7-dv9A0A075B639 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Trav6-7-dv9A0A075B639 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-7-dv9A0A075B639 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav6-7-dv9A0A075B639 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6-7-dv9A0A075B639 Gm7332-201ENSMUST00000118351 454 ntBASIC19■□□□□ 0.63
Trav6-7-dv9A0A075B639 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19■□□□□ 0.63
Trav6-7-dv9A0A075B639 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6-7-dv9A0A075B639 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19■□□□□ 0.63
Trav6-7-dv9A0A075B639 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19■□□□□ 0.63
Trav6-7-dv9A0A075B639 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trav6-7-dv9A0A075B639 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6-7-dv9A0A075B639 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6-7-dv9A0A075B639 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6-7-dv9A0A075B639 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-7-dv9A0A075B639 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-7-dv9A0A075B639 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-7-dv9A0A075B639 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-7-dv9A0A075B639 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.99■□□□□ 0.63
Trav6-7-dv9A0A075B639 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.99■□□□□ 0.63
Trav6-7-dv9A0A075B639 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-7-dv9A0A075B639 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trav6-7-dv9A0A075B639 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-7-dv9A0A075B639 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-7-dv9A0A075B639 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-7-dv9A0A075B639 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-7-dv9A0A075B639 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-7-dv9A0A075B639 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.97■□□□□ 0.63
Trav6-7-dv9A0A075B639 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-7-dv9A0A075B639 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-7-dv9A0A075B639 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trav6-7-dv9A0A075B639 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-7-dv9A0A075B639 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-7-dv9A0A075B639 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-7-dv9A0A075B639 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-7-dv9A0A075B639 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav6-7-dv9A0A075B639 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.96■□□□□ 0.63
Trav6-7-dv9A0A075B639 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-7-dv9A0A075B639 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
Trav6-7-dv9A0A075B639 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-7-dv9A0A075B639 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-7-dv9A0A075B639 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trav6-7-dv9A0A075B639 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.95■□□□□ 0.62
Trav6-7-dv9A0A075B639 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-7-dv9A0A075B639 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-7-dv9A0A075B639 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-7-dv9A0A075B639 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-7-dv9A0A075B639 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-7-dv9A0A075B639 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-7-dv9A0A075B639 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-7-dv9A0A075B639 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6-7-dv9A0A075B639 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6-7-dv9A0A075B639 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav6-7-dv9A0A075B639 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6-7-dv9A0A075B639 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6-7-dv9A0A075B639 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav6-7-dv9A0A075B639 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6-7-dv9A0A075B639 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6-7-dv9A0A075B639 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trav6-7-dv9A0A075B639 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav6-7-dv9A0A075B639 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav6-7-dv9A0A075B639 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6-7-dv9A0A075B639 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.93■□□□□ 0.62
Trav6-7-dv9A0A075B639 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6-7-dv9A0A075B639 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav6-7-dv9A0A075B639 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-7-dv9A0A075B639 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-7-dv9A0A075B639 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms