Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.24■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.23■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Gm7432-201ENSMUST00000210343 879 ntBASIC18.21■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.2■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.19■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.19■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.18■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.18■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Gm11599-201ENSMUST00000118720 878 ntBASIC18.17■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.17■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.17■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.16■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Trav15d-1-dv6d-1A0A075B624 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.14■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.14■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.13■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.12■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.12■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms