Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav13d-1A0A075B606 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.64■□□□□ 0.09
Trav13d-1A0A075B606 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav13d-1A0A075B606 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-1A0A075B606 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-1A0A075B606 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-1A0A075B606 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-1A0A075B606 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav13d-1A0A075B606 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav13d-1A0A075B606 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-1A0A075B606 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-1A0A075B606 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-1A0A075B606 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-1A0A075B606 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav13d-1A0A075B606 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav13d-1A0A075B606 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.62■□□□□ 0.09
Trav13d-1A0A075B606 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav13d-1A0A075B606 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Trav13d-1A0A075B606 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-1A0A075B606 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav13d-1A0A075B606 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Trav13d-1A0A075B606 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-1A0A075B606 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-1A0A075B606 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Trav13d-1A0A075B606 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav13d-1A0A075B606 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-1A0A075B606 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav13d-1A0A075B606 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-1A0A075B606 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-1A0A075B606 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav13d-1A0A075B606 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.6■□□□□ 0.09
Trav13d-1A0A075B606 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Trav13d-1A0A075B606 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-1A0A075B606 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav13d-1A0A075B606 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-1A0A075B606 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-1A0A075B606 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-1A0A075B606 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-1A0A075B606 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-1A0A075B606 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.59■□□□□ 0.09
Trav13d-1A0A075B606 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-1A0A075B606 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-1A0A075B606 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav13d-1A0A075B606 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-1A0A075B606 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-1A0A075B606 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav13d-1A0A075B606 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trav13d-1A0A075B606 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-1A0A075B606 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav13d-1A0A075B606 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-1A0A075B606 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-1A0A075B606 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-1A0A075B606 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav13d-1A0A075B606 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-1A0A075B606 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-1A0A075B606 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-1A0A075B606 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-1A0A075B606 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trav13d-1A0A075B606 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav13d-1A0A075B606 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-1A0A075B606 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.56■□□□□ 0.08
Trav13d-1A0A075B606 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.56■□□□□ 0.08
Trav13d-1A0A075B606 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-1A0A075B606 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-1A0A075B606 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-1A0A075B606 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-1A0A075B606 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-1A0A075B606 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-1A0A075B606 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-1A0A075B606 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-1A0A075B606 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.55■□□□□ 0.08
Trav13d-1A0A075B606 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms