Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Gm13238-201ENSMUST00000117655 780 ntBASIC17.62■□□□□ 0.41
Trav7n-5A0A075B604 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-5A0A075B604 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.62■□□□□ 0.41
Trav7n-5A0A075B604 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-5A0A075B604 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-5A0A075B604 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-5A0A075B604 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-5A0A075B604 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav7n-5A0A075B604 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trav7n-5A0A075B604 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7n-5A0A075B604 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trav7n-5A0A075B604 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7n-5A0A075B604 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7n-5A0A075B604 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav7n-5A0A075B604 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav7n-5A0A075B604 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7n-5A0A075B604 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav7n-5A0A075B604 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7n-5A0A075B604 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7n-5A0A075B604 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7n-5A0A075B604 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.58■□□□□ 0.41
Trav7n-5A0A075B604 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav7n-5A0A075B604 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav7n-5A0A075B604 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav7n-5A0A075B604 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav7n-5A0A075B604 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.58■□□□□ 0.4
Trav7n-5A0A075B604 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav7n-5A0A075B604 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.58■□□□□ 0.4
Trav7n-5A0A075B604 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav7n-5A0A075B604 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7n-5A0A075B604 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7n-5A0A075B604 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7n-5A0A075B604 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7n-5A0A075B604 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7n-5A0A075B604 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7n-5A0A075B604 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.57■□□□□ 0.4
Trav7n-5A0A075B604 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7n-5A0A075B604 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.57■□□□□ 0.4
Trav7n-5A0A075B604 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.57■□□□□ 0.4
Trav7n-5A0A075B604 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav7n-5A0A075B604 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav7n-5A0A075B604 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav7n-5A0A075B604 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7n-5A0A075B604 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7n-5A0A075B604 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7n-5A0A075B604 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trav7n-5A0A075B604 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7n-5A0A075B604 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7n-5A0A075B604 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav7n-5A0A075B604 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
Trav7n-5A0A075B604 Gm5812-201ENSMUST00000061073 957 ntBASIC17.56■□□□□ 0.4
Trav7n-5A0A075B604 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7n-5A0A075B604 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7n-5A0A075B604 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7n-5A0A075B604 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7n-5A0A075B604 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7n-5A0A075B604 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7n-5A0A075B604 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav7n-5A0A075B604 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trav7n-5A0A075B604 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7n-5A0A075B604 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trav7n-5A0A075B604 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.54■□□□□ 0.4
Trav7n-5A0A075B604 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.54■□□□□ 0.4
Trav7n-5A0A075B604 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7n-5A0A075B604 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7n-5A0A075B604 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Trav7n-5A0A075B604 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7n-5A0A075B604 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7n-5A0A075B604 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7n-5A0A075B604 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav7n-5A0A075B604 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7n-5A0A075B604 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7n-5A0A075B604 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7n-5A0A075B604 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7n-5A0A075B604 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7n-5A0A075B604 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7n-5A0A075B604 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7n-5A0A075B604 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7n-5A0A075B604 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7n-5A0A075B604 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7n-5A0A075B604 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7n-5A0A075B604 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7n-5A0A075B604 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7n-5A0A075B604 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav7n-5A0A075B604 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
Trav7n-5A0A075B604 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav7n-5A0A075B604 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7n-5A0A075B604 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms