Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Gm18062-201ENSMUST00000208020 547 ntBASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Gm18055-201ENSMUST00000208254 547 ntBASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 AC153522.1-201ENSMUST00000220047 1090 ntBASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Gm6180-201ENSMUST00000065243 498 ntBASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Gm23984-201ENSMUST00000157139 203 ntBASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Gm43058-201ENSMUST00000197645 625 ntBASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 AC153529.1-201ENSMUST00000217818 370 ntBASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retreg3Q9CQV4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retreg3Q9CQV4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Retreg3Q9CQV4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms