Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 SPDYE11-202ENST00000450699 704 ntBASIC14.47□□□□□ -0.09
TMEM54Q969K7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 AC105233.2-201ENST00000523697 349 ntBASIC14.47□□□□□ -0.09
TMEM54Q969K7 AF228730.5-201ENST00000530288 346 ntBASIC14.47□□□□□ -0.09
TMEM54Q969K7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 AC243562.1-201ENST00000560672 389 ntBASIC14.47□□□□□ -0.09
TMEM54Q969K7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 AC005829.1-201ENST00000570002 483 ntBASIC14.47□□□□□ -0.09
TMEM54Q969K7 SPDYE9P-201ENST00000570642 692 ntBASIC14.47□□□□□ -0.09
TMEM54Q969K7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 AC027307.2-201ENST00000591252 911 ntBASIC14.47□□□□□ -0.09
TMEM54Q969K7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 SPDYE10P-202ENST00000612005 668 ntBASIC14.47□□□□□ -0.09
TMEM54Q969K7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 SPDYE8P-202ENST00000612377 668 ntBASIC14.47□□□□□ -0.09
TMEM54Q969K7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.47□□□□□ -0.09
TMEM54Q969K7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 MIR648-201ENST00000385046 94 ntBASIC14.46□□□□□ -0.09
TMEM54Q969K7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 KRT8P48-201ENST00000515599 1220 ntBASIC14.46□□□□□ -0.09
TMEM54Q969K7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 AL365330.1-201ENST00000607459 531 ntBASIC14.46□□□□□ -0.09
TMEM54Q969K7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM54Q969K7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM54Q969K7 ELL2P1-201ENST00000413990 1906 ntBASIC14.46□□□□□ -0.09
TMEM54Q969K7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TMEM54Q969K7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.46□□□□□ -0.1
TMEM54Q969K7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TMEM54Q969K7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.46□□□□□ -0.1
TMEM54Q969K7 TNRC18P3-201ENST00000441896 2691 ntBASIC14.46□□□□□ -0.1
TMEM54Q969K7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.46□□□□□ -0.1
TMEM54Q969K7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.46□□□□□ -0.1
TMEM54Q969K7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TMEM54Q969K7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TMEM54Q969K7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TMEM54Q969K7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TMEM54Q969K7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms