Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpa1Q8VEE4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Gm15467-201ENSMUST00000120582 445 ntBASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Gm37714-201ENSMUST00000194742 342 ntBASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Gm20553-201ENSMUST00000204205 844 ntBASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpa1Q8VEE4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Gm15427-201ENSMUST00000117288 531 ntBASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Gm18737-201ENSMUST00000173594 937 ntBASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Gm13615-201ENSMUST00000120242 1612 ntBASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpa1Q8VEE4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms