Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Depdc1bQ8BH88 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Depdc1bQ8BH88 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Gm24420-201ENSMUST00000176676 59 ntBASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Gm18187-201ENSMUST00000196476 984 ntBASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Gm9908-201ENSMUST00000211534 448 ntBASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.64□□□□□ -0.07
Depdc1bQ8BH88 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Depdc1bQ8BH88 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms