Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.61□□□□□ -0.39
Sox17Q61473 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sox17Q61473 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.61□□□□□ -0.39
Sox17Q61473 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Sox17Q61473 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox17Q61473 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox17Q61473 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Mir698-201ENSMUST00000102164 109 ntBASIC12.6□□□□□ -0.39
Sox17Q61473 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Sox17Q61473 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.6□□□□□ -0.39
Sox17Q61473 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Sox17Q61473 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.6□□□□□ -0.39
Sox17Q61473 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.6□□□□□ -0.39
Sox17Q61473 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.6□□□□□ -0.39
Sox17Q61473 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox17Q61473 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox17Q61473 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Sox17Q61473 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox17Q61473 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sox17Q61473 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox17Q61473 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sox17Q61473 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sox17Q61473 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sox17Q61473 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.59□□□□□ -0.39
Sox17Q61473 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox17Q61473 Gm15678-201ENSMUST00000117573 960 ntBASIC12.59□□□□□ -0.39
Sox17Q61473 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.59□□□□□ -0.39
Sox17Q61473 Gm11745-201ENSMUST00000121669 448 ntBASIC12.59□□□□□ -0.39
Sox17Q61473 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.59□□□□□ -0.39
Sox17Q61473 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.59□□□□□ -0.39
Sox17Q61473 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.59□□□□□ -0.39
Sox17Q61473 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.59□□□□□ -0.39
Sox17Q61473 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.59□□□□□ -0.39
Sox17Q61473 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Gm5364-201ENSMUST00000216789 889 ntBASIC12.59□□□□□ -0.39
Sox17Q61473 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox17Q61473 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox17Q61473 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox17Q61473 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox17Q61473 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sox17Q61473 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox17Q61473 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Sox17Q61473 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.58□□□□□ -0.39
Sox17Q61473 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox17Q61473 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms