Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ClpbQ60649 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ClpbQ60649 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.93□□□□□ -0.34
ClpbQ60649 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ClpbQ60649 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ClpbQ60649 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.93□□□□□ -0.34
ClpbQ60649 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ClpbQ60649 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.93□□□□□ -0.34
ClpbQ60649 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.93□□□□□ -0.34
ClpbQ60649 Gm6745-201ENSMUST00000199216 526 ntBASIC12.93□□□□□ -0.34
ClpbQ60649 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.93□□□□□ -0.34
ClpbQ60649 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
ClpbQ60649 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.93□□□□□ -0.34
ClpbQ60649 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ClpbQ60649 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ClpbQ60649 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClpbQ60649 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
ClpbQ60649 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ClpbQ60649 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.92□□□□□ -0.34
ClpbQ60649 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.92□□□□□ -0.34
ClpbQ60649 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.92□□□□□ -0.34
ClpbQ60649 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Mir698-201ENSMUST00000102164 109 ntBASIC12.92□□□□□ -0.34
ClpbQ60649 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.92□□□□□ -0.34
ClpbQ60649 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ClpbQ60649 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ClpbQ60649 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.92□□□□□ -0.34
ClpbQ60649 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.92□□□□□ -0.34
ClpbQ60649 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.92□□□□□ -0.34
ClpbQ60649 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.92□□□□□ -0.34
ClpbQ60649 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.92□□□□□ -0.34
ClpbQ60649 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
ClpbQ60649 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ClpbQ60649 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ClpbQ60649 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ClpbQ60649 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.92□□□□□ -0.34
ClpbQ60649 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ClpbQ60649 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms