Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Gm10012-201ENSMUST00000078252 192 ntBASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Vps54Q5SPW0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Vps54Q5SPW0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Gm6447-201ENSMUST00000118905 835 ntBASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Gm11814-201ENSMUST00000119515 929 ntBASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Gm27486-201ENSMUST00000184923 80 ntBASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Gm7561-201ENSMUST00000211203 886 ntBASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vps54Q5SPW0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Gm14350-201ENSMUST00000116642 640 ntBASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Gm8810-201ENSMUST00000172895 754 ntBASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.11■□□□□ 0.17
Vps54Q5SPW0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms