Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Gm27459-201ENSMUST00000184860 107 ntBASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-3Q5R1C3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Gm6550-201ENSMUST00000187574 993 ntBASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms