Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3bQ3ULL6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Gm13689-201ENSMUST00000119360 685 ntBASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Gm12091-201ENSMUST00000146791 830 ntBASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Gm23984-201ENSMUST00000157139 203 ntBASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Gm38223-201ENSMUST00000194484 695 ntBASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3bQ3ULL6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Gm8515-201ENSMUST00000194852 576 ntBASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Gm6180-201ENSMUST00000065243 498 ntBASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Upf3bQ3ULL6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Grk6-205ENSMUST00000224653 2976 ntBASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Gm15371-201ENSMUST00000117057 784 ntBASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.38□□□□□ -0.11
Upf3bQ3ULL6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms