Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC15.74■□□□□ 0.11
Col5a2Q3U962 Gm45224-201ENSMUST00000208203 414 ntBASIC15.74■□□□□ 0.11
Col5a2Q3U962 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col5a2Q3U962 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.74■□□□□ 0.11
Col5a2Q3U962 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Gm16481-201ENSMUST00000119074 1227 ntBASIC15.73■□□□□ 0.11
Col5a2Q3U962 Gm12502-201ENSMUST00000120197 444 ntBASIC15.73■□□□□ 0.11
Col5a2Q3U962 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Gm13813-201ENSMUST00000120998 787 ntBASIC15.73■□□□□ 0.11
Col5a2Q3U962 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Gm9550-201ENSMUST00000161130 862 ntBASIC15.73■□□□□ 0.11
Col5a2Q3U962 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Gm44545-201ENSMUST00000208262 746 ntBASIC15.73■□□□□ 0.11
Col5a2Q3U962 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.73■□□□□ 0.11
Col5a2Q3U962 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.73■□□□□ 0.11
Col5a2Q3U962 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col5a2Q3U962 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Gm8566-201ENSMUST00000120174 465 ntBASIC15.72■□□□□ 0.11
Col5a2Q3U962 Gm12208-201ENSMUST00000122004 163 ntBASIC15.72■□□□□ 0.11
Col5a2Q3U962 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Gm27552-201ENSMUST00000183351 62 ntBASIC15.72■□□□□ 0.11
Col5a2Q3U962 Gm27844-201ENSMUST00000183613 62 ntBASIC15.72■□□□□ 0.11
Col5a2Q3U962 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC15.72■□□□□ 0.11
Col5a2Q3U962 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.72■□□□□ 0.11
Col5a2Q3U962 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.72■□□□□ 0.11
Col5a2Q3U962 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.72■□□□□ 0.11
Col5a2Q3U962 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col5a2Q3U962 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Col5a2Q3U962 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Gm37666-201ENSMUST00000194110 866 ntBASIC15.71■□□□□ 0.11
Col5a2Q3U962 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Gm44551-201ENSMUST00000208804 171 ntBASIC15.71■□□□□ 0.11
Col5a2Q3U962 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms