Protein–RNA interactions for Protein: Q08874

Mitf, Microphthalmia-associated transcription factor, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MitfQ08874 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MitfQ08874 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.45□□□□□ -0.42
MitfQ08874 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MitfQ08874 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
MitfQ08874 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MitfQ08874 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
MitfQ08874 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
MitfQ08874 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
MitfQ08874 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
MitfQ08874 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
MitfQ08874 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.45□□□□□ -0.42
MitfQ08874 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.44□□□□□ -0.42
MitfQ08874 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
MitfQ08874 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.44□□□□□ -0.42
MitfQ08874 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
MitfQ08874 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.44□□□□□ -0.42
MitfQ08874 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
MitfQ08874 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 AA619741-201ENSMUST00000195095 646 ntBASIC12.44□□□□□ -0.42
MitfQ08874 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.44□□□□□ -0.42
MitfQ08874 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
MitfQ08874 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.44□□□□□ -0.42
MitfQ08874 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
MitfQ08874 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.44□□□□□ -0.42
MitfQ08874 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.44□□□□□ -0.42
MitfQ08874 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.44□□□□□ -0.42
MitfQ08874 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MitfQ08874 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.43□□□□□ -0.42
MitfQ08874 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
MitfQ08874 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
MitfQ08874 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.43□□□□□ -0.42
MitfQ08874 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
MitfQ08874 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
MitfQ08874 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.43□□□□□ -0.42
MitfQ08874 Gm6222-201ENSMUST00000120787 396 ntBASIC12.43□□□□□ -0.42
MitfQ08874 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.43□□□□□ -0.42
MitfQ08874 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.43□□□□□ -0.42
MitfQ08874 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
MitfQ08874 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
MitfQ08874 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
MitfQ08874 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
MitfQ08874 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.43□□□□□ -0.42
MitfQ08874 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
MitfQ08874 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
MitfQ08874 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.43□□□□□ -0.42
MitfQ08874 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
MitfQ08874 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
MitfQ08874 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.43□□□□□ -0.42
MitfQ08874 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
MitfQ08874 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MitfQ08874 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MitfQ08874 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MitfQ08874 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
MitfQ08874 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MitfQ08874 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MitfQ08874 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms