Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Tpm1P58771 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15□□□□□ -0.01
Tpm1P58771 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Tpm1P58771 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Tpm1P58771 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Tpm1P58771 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15□□□□□ -0.01
Tpm1P58771 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Tpm1P58771 Mir698-201ENSMUST00000102164 109 ntBASIC15□□□□□ -0.01
Tpm1P58771 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Tpm1P58771 Gm8116-201ENSMUST00000182917 1201 ntBASIC15□□□□□ -0.01
Tpm1P58771 AC166997.1-201ENSMUST00000225122 572 ntBASIC15□□□□□ -0.01
Tpm1P58771 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Tpm1P58771 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Tpm1P58771 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm1P58771 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Tpm1P58771 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.99□□□□□ -0.01
Tpm1P58771 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.99□□□□□ -0.01
Tpm1P58771 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.99□□□□□ -0.01
Tpm1P58771 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.99□□□□□ -0.01
Tpm1P58771 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.99□□□□□ -0.01
Tpm1P58771 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Pck2-205ENSMUST00000226352 2784 ntBASIC14.99□□□□□ -0.01
Tpm1P58771 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.99□□□□□ -0.01
Tpm1P58771 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm1P58771 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Tpm1P58771 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.98□□□□□ -0.01
Tpm1P58771 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.98□□□□□ -0.01
Tpm1P58771 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Tpm1P58771 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Tpm1P58771 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.98□□□□□ -0.01
Tpm1P58771 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.98□□□□□ -0.01
Tpm1P58771 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.98□□□□□ -0.01
Tpm1P58771 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.98□□□□□ -0.01
Tpm1P58771 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.98□□□□□ -0.01
Tpm1P58771 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.98□□□□□ -0.01
Tpm1P58771 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.98□□□□□ -0.01
Tpm1P58771 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.98□□□□□ -0.01
Tpm1P58771 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Tpm1P58771 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.98□□□□□ -0.01
Tpm1P58771 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm1P58771 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.98□□□□□ -0.01
Tpm1P58771 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms