Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.27□□□□□ -0.29
Cd9P40240 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cd9P40240 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cd9P40240 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.26□□□□□ -0.29
Cd9P40240 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.26□□□□□ -0.29
Cd9P40240 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.26□□□□□ -0.29
Cd9P40240 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.26□□□□□ -0.29
Cd9P40240 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cd9P40240 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd9P40240 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
Cd9P40240 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.25□□□□□ -0.29
Cd9P40240 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Cd9P40240 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Cd9P40240 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.25□□□□□ -0.29
Cd9P40240 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cd9P40240 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cd9P40240 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cd9P40240 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cd9P40240 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Cd9P40240 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd9P40240 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd9P40240 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cd9P40240 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd9P40240 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cd9P40240 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd9P40240 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd9P40240 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd9P40240 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cd9P40240 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd9P40240 Gm12859-201ENSMUST00000117834 427 ntBASIC13.24□□□□□ -0.29
Cd9P40240 Gm6447-201ENSMUST00000118905 835 ntBASIC13.24□□□□□ -0.29
Cd9P40240 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd9P40240 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.24□□□□□ -0.29
Cd9P40240 Gm25927-201ENSMUST00000175058 117 ntBASIC13.24□□□□□ -0.29
Cd9P40240 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd9P40240 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cd9P40240 Gm37917-201ENSMUST00000194711 392 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms