Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.77□□□□□ -0.21
Cxcl12P40224 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.77□□□□□ -0.21
Cxcl12P40224 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl12P40224 Gm11531-201ENSMUST00000117614 555 ntBASIC13.77□□□□□ -0.21
Cxcl12P40224 Gm14208-201ENSMUST00000119645 678 ntBASIC13.77□□□□□ -0.21
Cxcl12P40224 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cxcl12P40224 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.77□□□□□ -0.21
Cxcl12P40224 Gm25732-201ENSMUST00000175168 60 ntBASIC13.77□□□□□ -0.21
Cxcl12P40224 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cxcl12P40224 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl12P40224 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl12P40224 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.77□□□□□ -0.21
Cxcl12P40224 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.77□□□□□ -0.21
Cxcl12P40224 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.77□□□□□ -0.21
Cxcl12P40224 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl12P40224 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl12P40224 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl12P40224 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.77□□□□□ -0.21
Cxcl12P40224 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl12P40224 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.77□□□□□ -0.21
Cxcl12P40224 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl12P40224 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl12P40224 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl12P40224 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Cxcl12P40224 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cxcl12P40224 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cxcl12P40224 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.76□□□□□ -0.21
Cxcl12P40224 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.76□□□□□ -0.21
Cxcl12P40224 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.76□□□□□ -0.21
Cxcl12P40224 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cxcl12P40224 Gm15547-201ENSMUST00000122152 333 ntBASIC13.76□□□□□ -0.21
Cxcl12P40224 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Gm2546-201ENSMUST00000182630 991 ntBASIC13.76□□□□□ -0.21
Cxcl12P40224 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.76□□□□□ -0.21
Cxcl12P40224 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Cxcl12P40224 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.76□□□□□ -0.21
Cxcl12P40224 Gm5950-201ENSMUST00000213337 772 ntBASIC13.76□□□□□ -0.21
Cxcl12P40224 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.76□□□□□ -0.21
Cxcl12P40224 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Gm8385-201ENSMUST00000058999 643 ntBASIC13.76□□□□□ -0.21
Cxcl12P40224 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.76□□□□□ -0.21
Cxcl12P40224 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.76□□□□□ -0.21
Cxcl12P40224 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.76□□□□□ -0.21
Cxcl12P40224 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.76□□□□□ -0.21
Cxcl12P40224 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl12P40224 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cxcl12P40224 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.75□□□□□ -0.21
Cxcl12P40224 Mir1943-201ENSMUST00000158276 73 ntBASIC13.75□□□□□ -0.21
Cxcl12P40224 Gm5904-201ENSMUST00000210286 865 ntBASIC13.75□□□□□ -0.21
Cxcl12P40224 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.75□□□□□ -0.21
Cxcl12P40224 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cxcl12P40224 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms