Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.75□□□□□ -0.21
P01878 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
P01878 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.75□□□□□ -0.21
P01878 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P01878 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P01878 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P01878 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
P01878 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.75□□□□□ -0.21
P01878 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
P01878 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.75□□□□□ -0.21
P01878 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P01878 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
P01878 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
P01878 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.74□□□□□ -0.21
P01878 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
P01878 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.74□□□□□ -0.21
P01878 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
P01878 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
P01878 Gm37489-201ENSMUST00000191883 159 ntBASIC13.74□□□□□ -0.21
P01878 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
P01878 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P01878 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.73□□□□□ -0.21
P01878 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
P01878 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Gm17208-201ENSMUST00000168388 535 ntBASIC13.73□□□□□ -0.21
P01878 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
P01878 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.73□□□□□ -0.21
P01878 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.73□□□□□ -0.21
P01878 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
P01878 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.73□□□□□ -0.21
P01878 Morn2-202ENSMUST00000227729 656 ntBASIC13.73□□□□□ -0.21
P01878 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.73□□□□□ -0.21
P01878 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
P01878 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
P01878 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
P01878 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.72□□□□□ -0.21
P01878 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.72□□□□□ -0.21
P01878 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.72□□□□□ -0.21
P01878 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Gm17376-201ENSMUST00000166016 84 ntBASIC13.72□□□□□ -0.21
P01878 Gm8738-201ENSMUST00000172606 329 ntBASIC13.72□□□□□ -0.21
P01878 Gm22121-201ENSMUST00000175148 54 ntBASIC13.72□□□□□ -0.21
P01878 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
P01878 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.72□□□□□ -0.21
P01878 Gm6458-201ENSMUST00000211573 635 ntBASIC13.72□□□□□ -0.21
P01878 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
P01878 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.72□□□□□ -0.21
P01878 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P01878 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
P01878 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P01878 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms