Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm10226O88253 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.35□□□□□ -0.75
Gm10226O88253 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm10226O88253 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.35□□□□□ -0.75
Gm10226O88253 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.35□□□□□ -0.75
Gm10226O88253 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.35□□□□□ -0.75
Gm10226O88253 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Gm10226O88253 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Gm10226O88253 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10226O88253 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.34□□□□□ -0.75
Gm10226O88253 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Gm10226O88253 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.34□□□□□ -0.75
Gm10226O88253 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Gm10226O88253 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Gm10226O88253 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.34□□□□□ -0.75
Gm10226O88253 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.34□□□□□ -0.75
Gm10226O88253 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Gm16202-201ENSMUST00000117532 544 ntBASIC10.34□□□□□ -0.75
Gm10226O88253 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.34□□□□□ -0.75
Gm10226O88253 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.34□□□□□ -0.75
Gm10226O88253 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.34□□□□□ -0.75
Gm10226O88253 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.34□□□□□ -0.75
Gm10226O88253 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Gm44069-201ENSMUST00000204898 506 ntBASIC10.34□□□□□ -0.75
Gm10226O88253 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.34□□□□□ -0.75
Gm10226O88253 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Gm10226O88253 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Gm10226O88253 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.34□□□□□ -0.75
Gm10226O88253 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Gm10226O88253 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.34□□□□□ -0.75
Gm10226O88253 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10226O88253 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10226O88253 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10226O88253 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Gm10226O88253 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10226O88253 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.33□□□□□ -0.76
Gm10226O88253 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10226O88253 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10226O88253 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10226O88253 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms