Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.23□□□□□ -0.45
Matn3O35701 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Matn3O35701 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.23□□□□□ -0.45
Matn3O35701 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Matn3O35701 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Matn3O35701 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.23□□□□□ -0.45
Matn3O35701 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Matn3O35701 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Matn3O35701 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Matn3O35701 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Matn3O35701 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Matn3O35701 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Matn3O35701 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Matn3O35701 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Matn3O35701 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.22□□□□□ -0.45
Matn3O35701 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.22□□□□□ -0.45
Matn3O35701 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Matn3O35701 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Matn3O35701 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.22□□□□□ -0.45
Matn3O35701 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Matn3O35701 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.22□□□□□ -0.45
Matn3O35701 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.22□□□□□ -0.45
Matn3O35701 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Matn3O35701 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.22□□□□□ -0.45
Matn3O35701 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Matn3O35701 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.22□□□□□ -0.45
Matn3O35701 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.22□□□□□ -0.45
Matn3O35701 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.22□□□□□ -0.45
Matn3O35701 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.22□□□□□ -0.45
Matn3O35701 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.22□□□□□ -0.45
Matn3O35701 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Matn3O35701 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Matn3O35701 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.21□□□□□ -0.45
Matn3O35701 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.21□□□□□ -0.45
Matn3O35701 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Matn3O35701 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Matn3O35701 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Matn3O35701 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Matn3O35701 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Matn3O35701 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.21□□□□□ -0.45
Matn3O35701 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.21□□□□□ -0.45
Matn3O35701 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Gm26308-201ENSMUST00000157768 69 ntBASIC12.21□□□□□ -0.45
Matn3O35701 Gm27920-201ENSMUST00000183953 96 ntBASIC12.21□□□□□ -0.45
Matn3O35701 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.21□□□□□ -0.45
Matn3O35701 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Matn3O35701 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Matn3O35701 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Matn3O35701 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Matn3O35701 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Matn3O35701 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Matn3O35701 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Matn3O35701 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Matn3O35701 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Matn3O35701 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Matn3O35701 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.2□□□□□ -0.46
Matn3O35701 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.2□□□□□ -0.46
Matn3O35701 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms