Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sh2b3O09039 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.98□□□□□ -0.49
Sh2b3O09039 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Mir1894-201ENSMUST00000122802 81 ntBASIC11.98□□□□□ -0.49
Sh2b3O09039 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Sh2b3O09039 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.98□□□□□ -0.49
Sh2b3O09039 Gm6244-201ENSMUST00000178732 841 ntBASIC11.98□□□□□ -0.49
Sh2b3O09039 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.98□□□□□ -0.49
Sh2b3O09039 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.98□□□□□ -0.49
Sh2b3O09039 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.98□□□□□ -0.49
Sh2b3O09039 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.98□□□□□ -0.49
Sh2b3O09039 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Sh2b3O09039 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Gm9899-201ENSMUST00000065519 555 ntBASIC11.98□□□□□ -0.49
Sh2b3O09039 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.98□□□□□ -0.49
Sh2b3O09039 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sh2b3O09039 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.98□□□□□ -0.49
Sh2b3O09039 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2b3O09039 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.97□□□□□ -0.49
Sh2b3O09039 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Gm15240-201ENSMUST00000118156 720 ntBASIC11.97□□□□□ -0.49
Sh2b3O09039 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Mir1938-201ENSMUST00000158746 100 ntBASIC11.97□□□□□ -0.49
Sh2b3O09039 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.97□□□□□ -0.49
Sh2b3O09039 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.97□□□□□ -0.49
Sh2b3O09039 AY702102-202ENSMUST00000194651 1173 ntBASIC11.97□□□□□ -0.49
Sh2b3O09039 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sh2b3O09039 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.97□□□□□ -0.49
Sh2b3O09039 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2b3O09039 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Sh2b3O09039 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms